aboutsummaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorHartmut Goebel <h.goebel@crazy-compilers.com>2016-06-02 13:29:52 +0200
committerLudovic Courtès <ludo@gnu.org>2016-06-05 00:05:38 +0200
commit698bd29799089c84bc2aa2c5f40e61eba83dd0b8 (patch)
tree1ab84a615f541fba557bacf842a77d7ef2650c5f /gnu/packages/bioinformatics.scm
parent1713c37f835a0566a47d76d2379b2d0b12c0b548 (diff)
downloadpatches-698bd29799089c84bc2aa2c5f40e61eba83dd0b8.tar
patches-698bd29799089c84bc2aa2c5f40e61eba83dd0b8.tar.gz
gnu: Use full SHA1 commit ids.
* gnu/packages/bioinformatics.scm (pbtranscript-tofu, mosaik, smithlab-cpp, piranha): Use full SHA1 commit ids. * gnu/packages/ci.scm (hydra): Likewise. * gnu/packages/compression.scm (sfarkxtc): Likewise. * gnu/packages/emacs.scm (emacs-ob-ipython): Likewise. * gnu/packages/games.scm (mars, emulation-station): Likewise. * gnu/packages/gnunet.scm (guile-gnunet): Likewise. * gnu/packages/music.scm (non-sequencer): Likewise. * gnu/packages/version-control.scm (git-flow, git-test-sequence): Likewise. * gnu/packages/xorg.scm (xf86-video-intel): Likewise. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm12
1 files changed, 6 insertions, 6 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 22bd81c75b..6a90aa9456 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2670,10 +2670,10 @@ the phenotype as it models the data.")
(license license:asl2.0)))
(define-public pbtranscript-tofu
- (let ((commit "8f5467fe6"))
+ (let ((commit "8f5467fe6a4472bcfb4226c8720993c8507adfe4"))
(package
(name "pbtranscript-tofu")
- (version (string-append "2.2.3." commit))
+ (version (string-append "2.2.3." (string-take commit 7)))
(source (origin
(method git-fetch)
(uri (git-reference
@@ -3009,7 +3009,7 @@ viewer.")
(delete 'configure))))))))
(define-public mosaik
- (let ((commit "5c25216d"))
+ (let ((commit "5c25216d3522d6a33e53875cd76a6d65001e4e67"))
(package
(name "mosaik")
(version "2.2.30")
@@ -3259,10 +3259,10 @@ subsequent visualization, annotation and storage of results.")
(define-public smithlab-cpp
(let ((revision "1")
- (commit "728a097"))
+ (commit "728a097bec88c6f4b8528b685932049e660eff2e"))
(package
(name "smithlab-cpp")
- (version (string-append "0." revision "." commit))
+ (version (string-append "0." revision "." (string-take commit 7)))
(source (origin
(method git-fetch)
(uri (git-reference
@@ -5169,7 +5169,7 @@ libraries for systems that do not have these available via other means.")
("samtools" ,samtools-0.1)
("gsl" ,gsl)
("smithlab-cpp"
- ,(let ((commit "3723e2d"))
+ ,(let ((commit "3723e2db438c51501d0423429ff396c3035ba46a"))
(origin
(method git-fetch)
(uri (git-reference