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| author | Ben Woodcroft <donttrustben@gmail.com> | 2016-07-23 15:15:12 +1000 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2016-07-23 15:15:12 +1000 |
| commit | e03a51530450e85f88dd36ad459f06950eb906ea (patch) | |
| tree | 9fed14e9db65da94f2cb3ffa41354d81c5239680 /gnu/packages/bioinformatics.scm | |
| parent | 26ad4adb5568c6ff370f446431b079520fb09615 (diff) | |
| download | patches-e03a51530450e85f88dd36ad459f06950eb906ea.tar patches-e03a51530450e85f88dd36ad459f06950eb906ea.tar.gz | |
gnu: fasttree: Update to 2.1.9.
* gnu/packages/bioinformatics.scm (fasttree): Update to 2.1.9.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 64 |
1 files changed, 32 insertions, 32 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 5cd92b8150..6065a0079b 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1831,7 +1831,7 @@ similarity of community members.") (define-public fasttree (package (name "fasttree") - (version "2.1.8") + (version "2.1.9") (source (origin (method url-fetch) (uri (string-append @@ -1839,7 +1839,7 @@ similarity of community members.") version ".c")) (sha256 (base32 - "0dzqc9vr9iiiw21y159xfjl2z90vw0y7r4x6456pcaxiy5hd2wmi")))) + "0ljvvw8i1als1wbfzvrf15c3ii2vw9db20a259g6pzg34xyyb97k")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; no "check" target @@ -1848,37 +1848,37 @@ similarity of community members.") (delete 'unpack) (delete 'configure) (replace 'build - (lambda* (#:key source #:allow-other-keys) - (and (zero? (system* "gcc" - "-O3" - "-finline-functions" - "-funroll-loops" - "-Wall" - "-o" - "FastTree" - source - "-lm")) - (zero? (system* "gcc" - "-DOPENMP" - "-fopenmp" - "-O3" - "-finline-functions" - "-funroll-loops" - "-Wall" - "-o" - "FastTreeMP" - source - "-lm"))))) + (lambda* (#:key source #:allow-other-keys) + (and (zero? (system* "gcc" + "-O3" + "-finline-functions" + "-funroll-loops" + "-Wall" + "-o" + "FastTree" + source + "-lm")) + (zero? (system* "gcc" + "-DOPENMP" + "-fopenmp" + "-O3" + "-finline-functions" + "-funroll-loops" + "-Wall" + "-o" + "FastTreeMP" + source + "-lm"))))) (replace 'install - (lambda* (#:key outputs #:allow-other-keys) - (let ((bin (string-append (assoc-ref outputs "out") - "/bin"))) - (mkdir-p bin) - (copy-file "FastTree" - (string-append bin "/FastTree")) - (copy-file "FastTreeMP" - (string-append bin "/FastTreeMP")) - #t)))))) + (lambda* (#:key outputs #:allow-other-keys) + (let ((bin (string-append (assoc-ref outputs "out") + "/bin"))) + (mkdir-p bin) + (copy-file "FastTree" + (string-append bin "/FastTree")) + (copy-file "FastTreeMP" + (string-append bin "/FastTreeMP")) + #t)))))) (home-page "http://www.microbesonline.org/fasttree") (synopsis "Infers approximately-maximum-likelihood phylogenetic trees") (description |