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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2015-04-16 15:16:57 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2015-04-21 17:57:22 +0200 |
| commit | 9794180d5e0c100a9d6094f8b91c7711b026c253 (patch) | |
| tree | aa1ccdc7317ee95ae8662e50fdcf22a67bb9c9c4 /gnu/packages/bioinformatics.scm | |
| parent | dbf4ed7c91adf3ebbc45f00a9f24a5f1647e570e (diff) | |
| download | patches-9794180d5e0c100a9d6094f8b91c7711b026c253.tar patches-9794180d5e0c100a9d6094f8b91c7711b026c253.tar.gz | |
gnu: Add bamtools.
* gnu/packages/bioinformatics.scm (bamtools): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7fc6af3c4e..950f9b472f 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -46,6 +46,29 @@ #:use-module (gnu packages xml) #:use-module (gnu packages zip)) +(define-public bamtools + (package + (name "bamtools") + (version "2.3.0") + (source (origin + (method url-fetch) + (uri (string-append + "https://github.com/pezmaster31/bamtools/archive/v" + version ".tar.gz")) + (file-name (string-append name "-" version ".tar.gz")) + (sha256 + (base32 + "1brry29bw2xr2l9pqn240rkqwayg85b8qq78zk2zs6nlspk4d018")))) + (build-system cmake-build-system) + (arguments `(#:tests? #f)) ;no "check" target + (inputs `(("zlib" ,zlib))) + (home-page "https://github.com/pezmaster31/bamtools") + (synopsis "C++ API and command-line toolkit for working with BAM data") + (description + "BamTools provides both a C++ API and a command-line toolkit for handling +BAM files.") + (license license:expat))) + (define-public bedops (package (name "bedops") |