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| author | Ben Woodcroft <donttrustben@gmail.com> | 2018-07-29 21:57:51 +1000 |
|---|---|---|
| committer | Ben Woodcroft <donttrustben@gmail.com> | 2018-07-29 21:58:00 +1000 |
| commit | 5d5a02dd4c036d790c209bc235a5702488f3cc33 (patch) | |
| tree | 918eed348e770b566a226831a33f2cb9936bb8f5 /gnu/packages/bioinformatics.scm | |
| parent | 10d53153613f97731a32a85077db6e0a4f2baa98 (diff) | |
| download | patches-5d5a02dd4c036d790c209bc235a5702488f3cc33.tar patches-5d5a02dd4c036d790c209bc235a5702488f3cc33.tar.gz | |
gnu: Add python-fastalite.
* gnu/packages/bioinformatics.scm (python-fastalite, python2-fastalite):
New variables.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index e87cef61be..4d84b90f1e 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -767,6 +767,29 @@ into separate processes; and more.") (define-public python2-biopython (package-with-python2 python-biopython)) +(define-public python-fastalite + (package + (name "python-fastalite") + (version "0.3") + (source + (origin + (method url-fetch) + (uri (pypi-uri "fastalite" version)) + (sha256 + (base32 + "1qli6pxp77i9xn2wfciq2zaxhl82bdxb33cpzqzj1z25yd036wqj")))) + (build-system python-build-system) + (arguments + `(#:tests? #f)) ; Test data is not distributed. + (home-page "https://github.com/nhoffman/fastalite") + (synopsis "Simplest possible FASTA parser") + (description "This library implements a FASTA and a FASTQ parser without +relying on a complex dependency tree.") + (license license:expat))) + +(define-public python2-fastalite + (package-with-python2 python-fastalite)) + (define-public bpp-core ;; The last release was in 2014 and the recommended way to install from source ;; is to clone the git repository, so we do this. |