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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:29:20 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:29:20 +0100 |
| commit | b7d93cf5087642103ae4a1f19ae38876d46c2b6c (patch) | |
| tree | a9df96d813f804a8c4f3d4088adbd345298e778c /gnu/packages/bioinformatics.scm | |
| parent | c3adc8305465318e3d83f2a881ab54076e288a0a (diff) | |
| download | patches-b7d93cf5087642103ae4a1f19ae38876d46c2b6c.tar patches-b7d93cf5087642103ae4a1f19ae38876d46c2b6c.tar.gz | |
gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 32 |
1 files changed, 0 insertions, 32 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index ef65dd9361..efe4c9b2f6 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8140,38 +8140,6 @@ the TxDb object of Mouse data as provided by UCSC (mm10, December 2011) based on the knownGene track.") (license license:artistic2.0))) -(define-public r-bsgenome-celegans-ucsc-ce6 - (package - (name "r-bsgenome-celegans-ucsc-ce6") - (version "1.4.0") - (source (origin - (method url-fetch) - ;; We cannot use bioconductor-uri here because this tarball is - ;; located under "data/annotation/" instead of "bioc/". - (uri (string-append "https://www.bioconductor.org/packages/" - "release/data/annotation/src/contrib/" - "BSgenome.Celegans.UCSC.ce6_" - version ".tar.gz")) - (sha256 - (base32 - "0mqzb353xv2c3m3vkb315dkmnxkgczp7ndnknyhpgjlybyf715v9")))) - (properties - `((upstream-name . "BSgenome.Celegans.UCSC.ce6"))) - (build-system r-build-system) - ;; As this package provides little more than a very large data file it - ;; doesn't make sense to build substitutes. - (arguments `(#:substitutable? #f)) - (propagated-inputs - `(("r-bsgenome" ,r-bsgenome))) - (home-page - "https://www.bioconductor.org/packages/BSgenome.Celegans.UCSC.ce6/") - (synopsis "Full genome sequences for Worm") - (description - "This package provides full genome sequences for Caenorhabditis -elegans (Worm) as provided by UCSC (ce6, May 2008) and stored in Biostrings -objects.") - (license license:artistic2.0))) - (define-public r-bsgenome-celegans-ucsc-ce10 (package (name "r-bsgenome-celegans-ucsc-ce10") |