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| author | Efraim Flashner <efraim@flashner.co.il> | 2017-07-04 15:21:33 +0300 |
|---|---|---|
| committer | Efraim Flashner <efraim@flashner.co.il> | 2017-07-04 22:55:44 +0300 |
| commit | ce7e361fa30d3dbe5c1da35f52dade2eb829aed7 (patch) | |
| tree | b8ebc0463b08c201d93d58423af4fad81ea7277e /gnu/packages/bioinformatics.scm | |
| parent | 0545e43a91c884f8dac07abad5a267e362b56d89 (diff) | |
| download | patches-ce7e361fa30d3dbe5c1da35f52dade2eb829aed7.tar patches-ce7e361fa30d3dbe5c1da35f52dade2eb829aed7.tar.gz | |
gnu: gemma: Fix building on non-Intel architectures.
* gnu/packages/patches/gemma-intel-compat.patch: New file.
* gnu/packages/bioinformatics.scm (gemma)[source]: Add patch.
[arguments]: Add NO_INTEL_COMPAT flag on non-Intel architectures.
* gnu/local.mk (dist_patch_DATA): Register patch.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 19 |
1 files changed, 11 insertions, 8 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 0ff0bbb9e3..55c2975a1e 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4,7 +4,7 @@ ;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2016 Roel Janssen <roel@gnu.org> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Marius Bakke <mbakke@fastmail.com> ;;; Copyright © 2016 Raoul Bonnal <ilpuccio.febo@gmail.com> ;;; @@ -99,7 +99,7 @@ #:use-module (gnu packages xml) #:use-module (gnu packages xorg) #:use-module (srfi srfi-1) - #:use-module (srfi srfi-26)) + #:use-module (ice-9 match)) (define-public r-ape (package @@ -2719,7 +2719,8 @@ comment or quality sections.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "055ynn16gd12pf78n4vr2a9jlwsbwzajpdnf2y2yilg1krfff222")))) + "055ynn16gd12pf78n4vr2a9jlwsbwzajpdnf2y2yilg1krfff222")) + (patches (search-patches "gemma-intel-compat.patch")))) (inputs `(("gsl" ,gsl) ("lapack" ,lapack) @@ -2727,11 +2728,13 @@ comment or quality sections.") (build-system gnu-build-system) (arguments `(#:make-flags - '(,@(if (any (cute string-prefix? <> (or (%current-system) - (%current-target-system))) - '("x86_64" "mips64el" "aarch64")) - '("FORCE_DYNAMIC=1") ; use shared libs - '("FORCE_DYNAMIC=1" "FORCE_32BIT=1"))) + '(,@(match (%current-system) + ("x86_64-linux" + '("FORCE_DYNAMIC=1")) + ("i686-linux" + '("FORCE_DYNAMIC=1" "FORCE_32BIT=1")) + (_ + '("FORCE_DYNAMIC=1" "NO_INTEL_COMPAT=1")))) #:phases (modify-phases %standard-phases (delete 'configure) |