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authorBen Woodcroft <donttrustben@gmail.com>2017-08-31 09:31:54 +0800
committerBen Woodcroft <donttrustben@gmail.com>2017-08-31 10:43:18 +0800
commit690a904ad766dfecf78749d121af528a7a49fa77 (patch)
treeef49217529233ca8f8ba3ad5caaa008fd844859d /gnu/packages/bioinformatics.scm
parent2d2e97bd71ac034900e26dd759b106fae0839162 (diff)
downloadpatches-690a904ad766dfecf78749d121af528a7a49fa77.tar
patches-690a904ad766dfecf78749d121af528a7a49fa77.tar.gz
gnu: metabat: Update to 2.11.3.
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.3. [source]: Use git-fetch. Remove boost-related patch. * gnu/packages/patches/metabat-fix-boost-issue.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm16
1 files changed, 8 insertions, 8 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index d0df0ee41a..e3729537bb 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3475,19 +3475,19 @@ form of assemblies or reads.")
(define-public metabat
(package
(name "metabat")
- (version "2.11.2")
+ (version "2.11.3")
(source
(origin
- (method url-fetch)
- (uri (string-append "https://bitbucket.org/berkeleylab/metabat/get/v"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://bitbucket.org/berkeleylab/metabat.git")
+ (commit "d0ad65367ffc8e08d1a9dd1388d6170daa047e5c")))
+ (file-name (string-append name "-" version "-checkout"))
(sha256
(base32
- "0rws9r1ziv6way8cf49jg8bzj7x2131kfqkhj8byf0z5hnrq3bwv"))
+ "1rlsrkz8iq8xah65222p055kzv5i3szz8bwysnvnh0pv72wvv6ww"))
(patches (search-patches "metabat-remove-compilation-date.patch"
- "metabat-fix-compilation.patch"
- "metabat-fix-boost-issue.patch"))))
+ "metabat-fix-compilation.patch"))))
(build-system gnu-build-system)
(arguments
`(#:phases