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authorTobias Geerinckx-Rice <me@tobias.gr>2016-12-15 11:16:46 +0100
committerTobias Geerinckx-Rice <me@tobias.gr>2016-12-19 20:33:32 +0100
commit1f94bff2d4e46a737d5c44ffcc43c7157d7a2178 (patch)
tree4b4834aa00d9047d15d86c0820e61f08aeea713d /gnu/packages/bioinformatics.scm
parent361a2fcf8dc0ea6063f7c23d55ccec474e694330 (diff)
downloadpatches-1f94bff2d4e46a737d5c44ffcc43c7157d7a2178.tar
patches-1f94bff2d4e46a737d5c44ffcc43c7157d7a2178.tar.gz
gnu: cutadapt: Update to 1.12.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.12. [inputs]: Add python-xopen.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm6
1 files changed, 4 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 122205f968..f363936421 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1804,7 +1804,7 @@ preparation protocols.")
(define-public cutadapt
(package
(name "cutadapt")
- (version "1.8")
+ (version "1.12")
(source (origin
(method url-fetch)
(uri (string-append
@@ -1813,7 +1813,7 @@ preparation protocols.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "161bp87y6gd6r5bmvjpn2b1k942i3fizfpa139f0jn6jv1wcp5h5"))))
+ "19smhh6444ikn4jlmyhvffw4m5aw7yg07rqsk7arg8dkwyga1i4v"))))
(build-system python-build-system)
(arguments
;; tests must be run after install
@@ -1830,6 +1830,8 @@ preparation protocols.")
"/site-packages"))
(zero? (system* "nosetests" "-P" "tests")))
(alist-delete 'check %standard-phases))))
+ (inputs
+ `(("python-xopen" ,python-xopen)))
(native-inputs
`(("python-cython" ,python-cython)
("python-nose" ,python-nose)))