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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-12-04 09:32:22 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-12-04 09:32:22 +0100 |
| commit | e7a8cf2e6ebdf045b90adf08c182680efe8746c1 (patch) | |
| tree | f7668ce18d5ff5aa006fc553e7ad9a4a9d710cf6 /gnu/packages/bioconductor.scm | |
| parent | 411be88bf32caf00c8f31600e3280ae95a85c4e7 (diff) | |
| download | patches-e7a8cf2e6ebdf045b90adf08c182680efe8746c1.tar patches-e7a8cf2e6ebdf045b90adf08c182680efe8746c1.tar.gz | |
gnu: r-bsgenome-hsapiens-ucsc-hg19: Use bioconductor-uri.
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19)[source]:
Use bioconductor-uri.
[arguments]: Enable substitution.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 11 |
1 files changed, 2 insertions, 9 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index fdb7ff0be8..4132973418 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -427,21 +427,14 @@ annotations for the genome of the model mouse Mus musculus.") (version "1.4.0") (source (origin (method url-fetch) - ;; We cannot use bioconductor-uri here because this tarball is - ;; located under "data/annotation/" instead of "bioc/". - (uri (string-append "https://www.bioconductor.org/packages/" - "release/data/annotation/src/contrib/" - "BSgenome.Hsapiens.UCSC.hg19_" - version ".tar.gz")) + (uri (bioconductor-uri "BSgenome.Hsapiens.UCSC.hg19" + version 'annotation)) (sha256 (base32 "1y0nqpk8cw5a34sd9hmin3z4v7iqm6hf6l22cl81vlbxqbjibxc8")))) (properties `((upstream-name . "BSgenome.Hsapiens.UCSC.hg19"))) (build-system r-build-system) - ;; As this package provides little more than a very large data file it - ;; doesn't make sense to build substitutes. - (arguments `(#:substitutable? #f)) (propagated-inputs `(("r-bsgenome" ,r-bsgenome))) (home-page |