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| author | Roel Janssen <roel@gnu.org> | 2020-04-26 21:02:00 +0200 |
|---|---|---|
| committer | Roel Janssen <roel@gnu.org> | 2020-04-26 21:02:00 +0200 |
| commit | ec20858a6a9453af1d9bcf3b6efe564f352af2a7 (patch) | |
| tree | f57fc6a1d956cead8c7effec0f4f353b3cafadb2 /gnu/packages/bioconductor.scm | |
| parent | f47623843116c4a83240bb646edfcd9c0e1d8187 (diff) | |
| download | patches-ec20858a6a9453af1d9bcf3b6efe564f352af2a7.tar patches-ec20858a6a9453af1d9bcf3b6efe564f352af2a7.tar.gz | |
gnu: Add r-pasilla.
* gnu/packages/bioconductor.scm (r-pasilla): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 68d8e5b574..2d7663715a 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -811,6 +811,32 @@ performing parallel computations on multicore machines.") Disease Ontology.") (license license:artistic2.0))) +(define-public r-pasilla + (package + (name "r-pasilla") + (version "1.14.0") + (source (origin + (method url-fetch) + (uri (string-append + "http://bioconductor.org/packages/release/data/experiment" + "/src/contrib/pasilla_" version ".tar.gz")) + (sha256 + (base32 + "0h124i2fb2lbj2k48zzf1n7ldqa471bs26fbd9vw50299aqx28x0")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocstyle" ,r-biocstyle) + ("r-dexseq" ,r-dexseq) + ("r-knitr" ,r-knitr) + ("r-rmarkdown" ,r-rmarkdown))) + (home-page "https://www.bioconductor.org/packages/pasilla/") + (synopsis "Data package with per-exon and per-gene read counts") + (description "This package provides per-exon and per-gene read counts +computed for selected genes from RNA-seq data that were presented in the +article 'Conservation of an RNA regulatory map between Drosophila and mammals' +by Brooks et al., Genome Research 2011.") + (license license:lgpl2.1+))) + (define-public r-pfam-db (package (name "r-pfam-db") |