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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:05:43 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:07:49 +0100 |
| commit | 3d13b448e5e5a4eff7a94ca38ee051206daab96d (patch) | |
| tree | 2581243fcc232473aeecc0e390250812ec56a02e /gnu/packages/bioconductor.scm | |
| parent | 6aa896d82e60a2e45b644b2d485dc5fc6b901c0c (diff) | |
| download | patches-3d13b448e5e5a4eff7a94ca38ee051206daab96d.tar patches-3d13b448e5e5a4eff7a94ca38ee051206daab96d.tar.gz | |
gnu: r-copynumber: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 49765096d9..bbfe68c5cc 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1204,6 +1204,29 @@ Viewer (SAV) files, access data, and generate QC plots.") sequencing data.") (license license:gpl2+))) +(define-public r-copynumber + (package + (name "r-copynumber") + (version "1.22.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "copynumber" version)) + (sha256 + (base32 + "0ipwj9i5p1bwhg5d80jdjagm02krpj2v0j47qdgw41h8wncdyal3")))) + (build-system r-build-system) + (propagated-inputs + `(("r-s4vectors" ,r-s4vectors) + ("r-iranges" ,r-iranges) + ("r-genomicranges" ,r-genomicranges) + ("r-biocgenerics" ,r-biocgenerics))) + (home-page "https://bioconductor.org/packages/copynumber") + (synopsis "Segmentation of single- and multi-track copy number data") + (description + "This package segments single- and multi-track copy number data by a +penalized least squares regression method.") + (license license:artistic2.0))) + (define-public r-dnacopy (package (name "r-dnacopy") |