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authorRicardo Wurmus <rekado@elephly.net>2019-12-17 19:48:58 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-12-17 20:02:18 +0100
commit29fd736a66bd503c325f95625871d0ebcad6dd69 (patch)
tree840534bce3d7137425c568c75f92dcef171110de /gnu/packages/bioconductor.scm
parent48bcbef07a773ad4f0b8a07caec2ba1eb6b8bab0 (diff)
downloadpatches-29fd736a66bd503c325f95625871d0ebcad6dd69.tar
patches-29fd736a66bd503c325f95625871d0ebcad6dd69.tar.gz
gnu: Add r-biobroom.
* gnu/packages/bioconductor.scm (r-biobroom): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm30
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 0b3df4f59c..577a43c87c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6926,3 +6926,33 @@ cross-target analyses of both public and custom bioassays, generation of
preloaded database that provides access to a substantial portion of publicly
available bioactivity data.")
(license license:artistic2.0)))
+
+(define-public r-biobroom
+ (package
+ (name "r-biobroom")
+ (version "1.18.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "biobroom" version))
+ (sha256
+ (base32
+ "1480ycdsh9xdhbpr47vdw5g6m8arqsnp8hc19wwhzm8npxh4qqlb"))))
+ (properties `((upstream-name . "biobroom")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biobase" ,r-biobase)
+ ("r-broom" ,r-broom)
+ ("r-dplyr" ,r-dplyr)
+ ("r-tidyr" ,r-tidyr)))
+ (home-page "https://github.com/StoreyLab/biobroom")
+ (synopsis "Turn Bioconductor objects into tidy data frames")
+ (description
+ "This package contains methods for converting standard objects
+constructed by bioinformatics packages, especially those in Bioconductor, and
+converting them to @code{tidy} data. It thus serves as a complement to the
+@code{broom} package, and follows the same tidy, augment, glance division of
+tidying methods. Tidying data makes it easy to recombine, reshape and
+visualize bioinformatics analyses.")
+ ;; Any version of the LGPL.
+ (license license:lgpl3+)))