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authorRicardo Wurmus <rekado@elephly.net>2019-04-03 17:42:01 +0200
committerRicardo Wurmus <rekado@elephly.net>2019-04-03 17:42:18 +0200
commit307586c1e3b3fce8a9acc6f494f4972e6d4c3a79 (patch)
tree95f45ec0cff88010b0faa19611a912772afb9af8 /gnu/packages/bioconductor.scm
parentb50c966087b908e046da06e330c01e6d7a1ae9ca (diff)
downloadpatches-307586c1e3b3fce8a9acc6f494f4972e6d4c3a79.tar
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gnu: Add r-arrmnormalization.
* gnu/packages/bioconductor.scm (r-arrmnormalization): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm23
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index b949b894c5..3eabedf076 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4248,3 +4248,26 @@ expression. It contains the linear model inferred in the publication
\"Perturbation-response genes reveal signaling footprints in cancer gene
expression\".")
(license license:asl2.0)))
+
+(define-public r-arrmnormalization
+ (package
+ (name "r-arrmnormalization")
+ (version "1.22.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ARRmNormalization" version))
+ (sha256
+ (base32
+ "09wfd4vqfvmkpqn9dwqly1dz4h1ckh621jbwj1dab6q4z0dfmzmd"))))
+ (properties
+ `((upstream-name . "ARRmNormalization")))
+ (build-system r-build-system)
+ (propagated-inputs `(("r-arrmdata" ,r-arrmdata)))
+ (home-page "https://bioconductor.org/packages/ARRmNormalization/")
+ (synopsis "Adaptive robust regression normalization for methylation data")
+ (description
+ "This is a package to perform the @dfn{Adaptive Robust Regression
+method} (ARRm) for the normalization of methylation data from the Illumina
+Infinium HumanMethylation 450k assay.")
+ (license license:artistic2.0)))