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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-09-05 11:46:13 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-09-05 11:46:29 +0200 |
| commit | 6b5f59c7a6a6dfc8298b83a5bd9ac65fec7a09d6 (patch) | |
| tree | 6c87ee3d019678bd0f27a155771fce5e6760646e /gnu/packages/bioconductor.scm | |
| parent | 7d2cb646f7d0619ab924dd168d92fc176df629f0 (diff) | |
| download | patches-6b5f59c7a6a6dfc8298b83a5bd9ac65fec7a09d6.tar patches-6b5f59c7a6a6dfc8298b83a5bd9ac65fec7a09d6.tar.gz | |
gnu: Add r-bigmelon.
* gnu/packages/bioconductor.scm (r-bigmelon): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 8c57bd5788..3ba5415597 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5413,3 +5413,31 @@ byte. Data compression and decompression are available with relatively efficient random access. It is also allowed to read a GDS file in parallel with multiple R processes supported by the package @code{parallel}.") (license license:lgpl3))) + +(define-public r-bigmelon + (package + (name "r-bigmelon") + (version "1.10.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "bigmelon" version)) + (sha256 + (base32 + "0269kf3d34dbng3swk7pclpk02vy4k3askygmzi5my3fqyfzdkj9")))) + (properties `((upstream-name . "bigmelon"))) + (build-system r-build-system) + (propagated-inputs + `(("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-gdsfmt" ,r-gdsfmt) + ("r-geoquery" ,r-geoquery) + ("r-methylumi" ,r-methylumi) + ("r-minfi" ,r-minfi) + ("r-watermelon" ,r-watermelon))) + (home-page "https://bioconductor.org/packages/bigmelon/") + (synopsis "Illumina methylation array analysis for large experiments") + (description + "This package provides methods for working with Illumina arrays using the +@code{gdsfmt} package.") + (license license:gpl3))) |