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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2015-12-16 14:45:28 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-01-20 12:41:28 +0100 |
| commit | d0bd632f89e242a2a217d7e85194589f088f75ea (patch) | |
| tree | 10ad2a7ba31c1a0a18f8c48c2d915e0fcc33bdb0 /etc | |
| parent | 4c3d2b2a8f6f6249b497776e5513bbadf5c6aa4c (diff) | |
| download | patches-d0bd632f89e242a2a217d7e85194589f088f75ea.tar patches-d0bd632f89e242a2a217d7e85194589f088f75ea.tar.gz | |
import: Add Bioconductor importer and updater.
* guix/import/cran.scm (%bioconductor-updater,
latest-bioconductor-release, bioconductor-package?): New procedures.
(cran->guix-package): Support repositories other than CRAN.
(%bioconductor-url, %bioconductor-svn-url): New variables.
(description->package): Update signature to distinguish between packages
from different repositories.
(latest-release): Rename procedure ...
(latest-cran-release): ... to this.
(cran-package?): Do not assume all R packages are available on CRAN.
* tests/cran.scm: Update tests.
* guix/scripts/import/cran.scm: Add "--archive" option and default to
CRAN.
* guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater".
* doc/guix.texi: Document Bioconductor importer and updater.
Diffstat (limited to 'etc')
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