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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-08-28 00:38:31 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-08-29 11:38:12 +0200 |
| commit | ad553ec4b12f24a0bbd25b547bac885ddb84776a (patch) | |
| tree | b35b066e980d6a5fb14fa08198fd6e0492befcaa /doc/guix.texi | |
| parent | ce82e8bf5ba561759f95f610b41a6c0f65766397 (diff) | |
| download | patches-ad553ec4b12f24a0bbd25b547bac885ddb84776a.tar patches-ad553ec4b12f24a0bbd25b547bac885ddb84776a.tar.gz | |
import: cran: Add support for git repositories.
* guix/import/cran.scm (vcs-file?): New procedure.
(download): Support downloading from git.
(fetch-description): Add a clause for the 'git repository type.
(files-match-pattern?): New procedure.
(tarball-files-match-pattern?): Implement in terms of FILES-MATCH-PATTERN?.
(directory-needs-fortran?, directory-needs-zlib?,
directory-needs-pkg-config?): New procedures.
(needs-fortran?, needs-zlib?, needs-pkg-config?): Rename these procedures...
(tarball-needs-fortran?, tarball-needs-zlib?, tarball-needs-pkg-config?):
...to this, and use them.
(file-hash): New procedure.
(description->package): Handle the 'git repository type.
* guix/import/utils.scm (package->definition): Handle package expression
inside of a let.
* guix/scripts/import.scm (guix-import): Handle let expressions.
* doc/guix.texi (Invoking guix import): Document it.
Diffstat (limited to 'doc/guix.texi')
| -rw-r--r-- | doc/guix.texi | 8 |
1 files changed, 8 insertions, 0 deletions
diff --git a/doc/guix.texi b/doc/guix.texi index 5a64b89086..a87a8a3d9a 100644 --- a/doc/guix.texi +++ b/doc/guix.texi @@ -8638,6 +8638,14 @@ R package: guix import cran --archive=bioconductor GenomicRanges @end example +Finally, you can also import R packages that have not yet been published on +CRAN or Bioconductor as long as they are in a git repository. Use +@code{--archive=git} followed by the URL of the git repository: + +@example +guix import cran --archive=git https://github.com/immunogenomics/harmony +@end example + @item texlive @cindex TeX Live @cindex CTAN |