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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-07-03 16:19:24 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-07-03 16:20:28 +0200 |
| commit | c7d5cd6ca56241c5a17c2c917f6e03a26a03ee15 (patch) | |
| tree | 9abdb1b9443148f342d7154b07301c0a23465d9a | |
| parent | 29cbf8178f7fe97f42005f0d8b32f38c2caee041 (diff) | |
| download | patches-c7d5cd6ca56241c5a17c2c917f6e03a26a03ee15.tar patches-c7d5cd6ca56241c5a17c2c917f6e03a26a03ee15.tar.gz | |
gnu: pigx-rnaseq: Update to 0.0.4.
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.4.
[arguments]: Remove "wrap-executable" phase.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 12 |
1 files changed, 2 insertions, 10 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index c0ee641e88..e8408b95a4 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12831,7 +12831,7 @@ once. This package provides tools to perform Drop-seq analyses.") (define-public pigx-rnaseq (package (name "pigx-rnaseq") - (version "0.0.3") + (version "0.0.4") (source (origin (method url-fetch) (uri (string-append "https://github.com/BIMSBbioinfo/pigx_rnaseq/" @@ -12839,7 +12839,7 @@ once. This package provides tools to perform Drop-seq analyses.") "/pigx_rnaseq-" version ".tar.gz")) (sha256 (base32 - "0pz080k4ajlc4rlznkn3najy2a6874gb56rf9g4ag9wqz31q174j")))) + "16gla23rmziimqan7w494q0nr7vfbp42zzkrl9fracmr4k7b1kzr")))) (build-system gnu-build-system) (arguments `(#:parallel-tests? #f ; not supported @@ -12851,14 +12851,6 @@ once. This package provides tools to perform Drop-seq analyses.") (substitute* "Makefile.in" (("(^ tests/test_trim_galore/test.sh).*" _ m) m) (("^ test.sh") "")) - #t)) - (add-after 'install 'wrap-executable - ;; Make sure the executable finds all R modules. - (lambda* (#:key inputs outputs #:allow-other-keys) - (let ((out (assoc-ref outputs "out"))) - (wrap-program (string-append out "/bin/pigx-rnaseq") - `("R_LIBS_SITE" ":" = (,(getenv "R_LIBS_SITE"))) - `("PYTHONPATH" ":" = (,(getenv "PYTHONPATH"))))) #t))))) (inputs `(("gzip" ,gzip) |