diff options
| author | Mark H Weaver <mhw@netris.org> | 2017-08-09 17:25:31 -0400 |
|---|---|---|
| committer | Mark H Weaver <mhw@netris.org> | 2017-08-09 17:25:31 -0400 |
| commit | cc294bcee6bfaa4524ac43450e41f083539f9cb1 (patch) | |
| tree | 1248811a6fd39e9169fd4b3c58f456bd21d1c7d5 | |
| parent | 32b7506c987d8b7281382da4831958a64c048fc1 (diff) | |
| parent | ae7f246cf1c7e20ebf4025024bb10361938abaa2 (diff) | |
| download | patches-cc294bcee6bfaa4524ac43450e41f083539f9cb1.tar patches-cc294bcee6bfaa4524ac43450e41f083539f9cb1.tar.gz | |
Merge branch 'master' into core-updates
29 files changed, 640 insertions, 331 deletions
diff --git a/gnu/local.mk b/gnu/local.mk index ddfe96433c..f1ac9752c0 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -184,6 +184,7 @@ GNU_SYSTEM_MODULES = \ %D%/packages/gperf.scm \ %D%/packages/gprolog.scm \ %D%/packages/gps.scm \ + %D%/packages/graph.scm \ %D%/packages/graphics.scm \ %D%/packages/graphviz.scm \ %D%/packages/groff.scm \ @@ -985,7 +986,6 @@ dist_patch_DATA = \ %D%/packages/patches/rsem-makefile.patch \ %D%/packages/patches/ruby-concurrent-ignore-broken-test.patch \ %D%/packages/patches/ruby-concurrent-test-arm.patch \ - %D%/packages/patches/ruby-puma-ignore-broken-test.patch \ %D%/packages/patches/ruby-rack-ignore-failing-test.patch \ %D%/packages/patches/ruby-tzinfo-data-ignore-broken-test.patch\ %D%/packages/patches/rxvt-unicode-escape-sequences.patch \ diff --git a/gnu/packages/admin.scm b/gnu/packages/admin.scm index e8a1cb552c..a9cb2a52ac 100644 --- a/gnu/packages/admin.scm +++ b/gnu/packages/admin.scm @@ -13,7 +13,7 @@ ;;; Copyright © 2016 Peter Feigl <peter.feigl@nexoid.at> ;;; Copyright © 2016 John J. Foerch <jjfoerch@earthlink.net> ;;; Copyright © 2016, 2017 ng0 <contact.ng0@cryptolab.net> -;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2016 John Darrington <jmd@gnu.org> ;;; Copyright © 2017 Ben Sturmfels <ben@sturm.com.au> ;;; Copyright © 2017 Ethan R. Jones <doubleplusgood23@gmail.com> @@ -849,29 +849,29 @@ system administrator.") ;; Avoid non-determinism; see <http://bugs.gnu.org/21918>. #:parallel-build? #f - #:phases (alist-cons-before - 'configure 'pre-configure - (lambda _ - (substitute* "src/sudo_usage.h.in" - ;; Do not capture 'configure' arguments since we would - ;; unduly retain references, and also because the - ;; CPPFLAGS above would close the string literal - ;; prematurely. - (("@CONFIGURE_ARGS@") "\"\"")) - (substitute* (find-files "." "Makefile\\.in") - (("-o [[:graph:]]+ -g [[:graph:]]+") - ;; Allow installation as non-root. - "") - (("^install: (.*)install-sudoers(.*)" _ before after) - ;; Don't try to create /etc/sudoers. - (string-append "install: " before after "\n")) - (("\\$\\(DESTDIR\\)\\$\\(rundir\\)") - ;; Don't try to create /run/sudo. - "$(TMPDIR)/dummy") - (("\\$\\(DESTDIR\\)\\$\\(vardir\\)") - ;; Don't try to create /var/db/sudo. - "$(TMPDIR)/dummy"))) - %standard-phases) + #:phases + (modify-phases %standard-phases + (add-before 'configure 'pre-configure + (lambda _ + (substitute* "src/sudo_usage.h.in" + ;; Do not capture 'configure' arguments since we would + ;; unduly retain references, and also because the + ;; CPPFLAGS above would close the string literal + ;; prematurely. + (("@CONFIGURE_ARGS@") "\"\"")) + (substitute* (find-files "." "Makefile\\.in") + (("-o [[:graph:]]+ -g [[:graph:]]+") + ;; Allow installation as non-root. + "") + (("^install: (.*)install-sudoers(.*)" _ before after) + ;; Don't try to create /etc/sudoers. + (string-append "install: " before after "\n")) + (("\\$\\(DESTDIR\\)\\$\\(rundir\\)") + ;; Don't try to create /run/sudo. + "$(TMPDIR)/dummy") + (("\\$\\(DESTDIR\\)\\$\\(vardir\\)") + ;; Don't try to create /var/db/sudo. + "$(TMPDIR)/dummy"))))) ;; XXX: The 'testsudoers' test series expects user 'root' to exist, but ;; the chroot's /etc/passwd doesn't have it. Turn off the tests. diff --git a/gnu/packages/aspell.scm b/gnu/packages/aspell.scm index 509d428f64..3469c7a3ec 100644 --- a/gnu/packages/aspell.scm +++ b/gnu/packages/aspell.scm @@ -5,6 +5,7 @@ ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Christopher Andersson <christopher@8bits.nu> ;;; Copyright © 2016 Theodoros Foradis <theodoros.for@openmailbox.org> +;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -123,10 +124,10 @@ dictionaries, including personal ones.") (define-public aspell-dict-en (aspell-dictionary "en" "English" - #:version "2016.11.20-0" + #:version "2017.01.22-0" #:sha256 (base32 - "1496jnhh2jvhkzcj0p4vy89bcs4g5wz6a76m33vw4dhchn5xm9jw"))) + "1qamzpw1fsnn5n9jpsnnnzqj1a0m0xvsikmkdp5a6pmb7sp3ziwk"))) (define-public aspell-dict-eo (aspell-dictionary "eo" "Esperanto" diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 8d508c6ce1..f0c4e7748a 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -60,6 +60,7 @@ #:use-module (gnu packages gd) #:use-module (gnu packages gtk) #:use-module (gnu packages glib) + #:use-module (gnu packages graph) #:use-module (gnu packages groff) #:use-module (gnu packages guile) #:use-module (gnu packages haskell) @@ -8071,14 +8072,14 @@ in SNV base substitution data.") (define-public r-wgcna (package (name "r-wgcna") - (version "1.60") + (version "1.61") (source (origin (method url-fetch) (uri (cran-uri "WGCNA" version)) (sha256 (base32 - "16mxhwzhh5q48wmz1iba2r21cp0n0v8g11am4pi52iv6g0663ixl")))) + "1vrc2k33a196hrrl7k0z534fp96vv0shmigcr65ny1q0v6lq0h6i")))) (properties `((upstream-name . "WGCNA"))) (build-system r-build-system) (propagated-inputs @@ -8090,6 +8091,9 @@ in SNV base substitution data.") ("r-go-db" ,r-go-db) ("r-hmisc" ,r-hmisc) ("r-impute" ,r-impute) + ("r-rcpp" ,r-rcpp) + ("r-robust" ,r-robust) + ("r-survival" ,r-survival) ("r-matrixstats" ,r-matrixstats) ("r-preprocesscore" ,r-preprocesscore))) (home-page diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm index 2ab5c01359..ddfcf1750f 100644 --- a/gnu/packages/check.scm +++ b/gnu/packages/check.scm @@ -213,6 +213,8 @@ normally do not detect. The goal is to detect only real errors in the code (base32 "1n5p1m2m3fjrjdj752lf92f9wq3pl5cbsfrb49jqbg52ghkz99jq")))) (build-system cmake-build-system) + (arguments + `(#:configure-flags '("-DBUILD_SHARED_LIBS=ON"))) (native-inputs `(("python-2" ,python-2))) (home-page "https://github.com/google/googletest/") diff --git a/gnu/packages/debug.scm b/gnu/packages/debug.scm index 34c1061418..bde06f35b9 100644 --- a/gnu/packages/debug.scm +++ b/gnu/packages/debug.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2014, 2015, 2016 Eric Bavier <bavier@member.fsf.org> +;;; Copyright © 2014, 2015, 2016, 2017 Eric Bavier <bavier@member.fsf.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -287,20 +287,26 @@ down the road.") ;; not accept a directory name instead. To let the gnu-build-system's ;; patch-* phases work properly, we unpack the source first, then ;; repack before the configure phase. - `(#:configure-flags '("--with-make-tar=./make.tar.xz") - #:phases - (modify-phases %standard-phases - (add-after 'unpack 'unpack-make - (lambda* (#:key inputs #:allow-other-keys) - (zero? (system* "tar" "xf" (assoc-ref inputs "make-source"))))) - (add-before 'configure 'repack-make - (lambda _ - (zero? (system* "tar" "cJf" "./make.tar.xz" - (string-append "make-" - ,(package-version gnu-make)))))) - (add-before 'configure 'bootstrap - (lambda _ - (zero? (system* "autoreconf" "-vfi"))))))) + (let ((make-dir (string-append "make-" (package-version gnu-make)))) + `(#:configure-flags '("--with-make-tar=./make.tar.xz") + #:phases + (modify-phases %standard-phases + (add-after 'unpack 'unpack-make + (lambda* (#:key inputs #:allow-other-keys) + (zero? (system* "tar" "xf" (assoc-ref inputs "make-source"))))) + (add-after 'unpack-make 'set-default-shell + (lambda _ + ;; Taken mostly directly from (@ (gnu packages base) gnu-make) + (substitute* (string-append ,make-dir "/job.c") + (("default_shell = .*$") + (format #f "default_shell = \"~a\";\n" + (which "sh")))))) + (add-before 'configure 'repack-make + (lambda _ + (zero? (system* "tar" "cJf" "./make.tar.xz" ,make-dir)))) + (add-before 'configure 'bootstrap + (lambda _ + (zero? (system* "autoreconf" "-vfi")))))))) (home-page "https://github.com/losalamos/stress-make") (synopsis "Expose race conditions in Makefiles") (description diff --git a/gnu/packages/fonts.scm b/gnu/packages/fonts.scm index e421b2c6ab..b01d39c7e2 100644 --- a/gnu/packages/fonts.scm +++ b/gnu/packages/fonts.scm @@ -140,7 +140,7 @@ provide serif, sans and monospaced variants.") (base32 "1p3qs51x5327gnk71yq8cvmxc6wgx79sqxfvxcv80cdvgggjfnyv")))) (build-system font-build-system) - (home-page "http://www.gnome.org/fonts/") + (home-page "https://www.gnome.org/fonts/") (synopsis "Bitstream Vera sans-serif typeface") (description "Vera is a sans-serif typeface from Bitstream, Inc. This package provides the TrueType (TTF) files.") diff --git a/gnu/packages/game-development.scm b/gnu/packages/game-development.scm index efd8f6d034..c98c15e462 100644 --- a/gnu/packages/game-development.scm +++ b/gnu/packages/game-development.scm @@ -35,6 +35,7 @@ #:use-module (guix build-system gnu) #:use-module (guix build-system python) #:use-module (gnu packages) + #:use-module (gnu packages autotools) #:use-module (gnu packages boost) #:use-module (gnu packages curl) #:use-module (gnu packages databases) @@ -45,6 +46,7 @@ #:use-module (gnu packages glib) #:use-module (gnu packages gnunet) #:use-module (gnu packages guile) + #:use-module (gnu packages m4) #:use-module (gnu packages multiprecision) #:use-module (gnu packages music) #:use-module (gnu packages ncurses) @@ -893,3 +895,42 @@ suitable for pixel art, game graphics, and generally any detailed graphics painted with a mouse.") (home-page "http://pulkomandy.tk/projects/GrafX2") (license license:gpl2))) ; GPLv2 only + +(define-public ois + (package + (name "ois") + (version "1.3") + (source + (origin + ;; Development has moved to github and there are no recent tarball + ;; releases. + (method git-fetch) + (uri (git-reference + (url "https://github.com/wgois/OIS.git") + (commit "bb75ccc1aabc1c547195579963601ff6080ca2f2"))) + (file-name (string-append name "-" version)) + (sha256 + (base32 + "0w0pamjc3vj0jr718hysrw8x076fq6n9rd6wcb36sn2jd0lqvi98")))) + (build-system gnu-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'bootstrap + (lambda _ (zero? (system* "sh" "bootstrap"))))))) + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("libtool" ,libtool) + ("m4" ,m4) + ("pkg-config" ,pkg-config))) + (inputs + `(("libxaw" ,libxaw))) + (synopsis "Object Oriented Input System") + (description + "Cross Platform Object Oriented Input Lib System is a cross platform, +simple solution for using all kinds of Input Devices (Keyboards, Mice, +Joysticks, etc) and feedback devices (e.g. force feedback). Meant to be very +robust and compatible with many systems and operating systems.") + (home-page "https://github.com/wgois/OIS") + (license license:zlib))) diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm index 408b3b46d0..9f32e9f8e5 100644 --- a/gnu/packages/games.scm +++ b/gnu/packages/games.scm @@ -4384,7 +4384,7 @@ fight against their plot and save his fellow rabbits from slavery.") (define-public 0ad-data (package (name "0ad-data") - (version "0.0.21-alpha") + (version "0.0.22-alpha") (source (origin (method url-fetch) @@ -4393,7 +4393,7 @@ fight against their plot and save his fellow rabbits from slavery.") (file-name (string-append name "-" version ".tar.xz")) (sha256 (base32 - "15xadyrpvq27lm9p1ny7bcmmv56m16h3xadbkdx69gfkzxc3razk")) + "0vknk9ay9h2p34r7mym2g066f3s3c5d5vmap0ckcs5b86h5cscjc")) (modules '((guix build utils))) (snippet #~(begin @@ -4438,7 +4438,7 @@ fight against their plot and save his fellow rabbits from slavery.") (define-public 0ad (package (name "0ad") - (version "0.0.21-alpha") + (version "0.0.22-alpha") (source (origin (method url-fetch) @@ -4447,7 +4447,7 @@ fight against their plot and save his fellow rabbits from slavery.") (file-name (string-append name "-" version ".tar.xz")) (sha256 (base32 - "1kw3hqnr737ipx4f03khz3hvsh3ha7r8iy9njppk2faa53j27gln")) + "1cgmr4g5g9wv36v7ylbrvqhsjwgcsdgbqwc8zlqmnayk9zgkdpgx")) ;; A snippet here would cause a build failure because of timestamps ;; reset. See https://bugs.gnu.org/26734. )) diff --git a/gnu/packages/gimp.scm b/gnu/packages/gimp.scm index 362e2047fa..13d2a68dba 100644 --- a/gnu/packages/gimp.scm +++ b/gnu/packages/gimp.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2014, 2015 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; ;;; This file is part of GNU Guix. ;;; @@ -43,7 +43,7 @@ (define-public babl (package (name "babl") - (version "0.1.18") + (version "0.1.28") (source (origin (method url-fetch) (uri (list (string-append "https://download.gimp.org/pub/babl/" @@ -54,7 +54,7 @@ version ".tar.bz2"))) (sha256 (base32 - "1ygvnq22pf0zvf3bj7h67vvbpz7b8hhjvrr79ribws7sr5dljfj8")))) + "00w6xfcv960c98qvxv81gcbj8l1jiab9sggmdl77m19awwiyvwv3")))) (build-system gnu-build-system) (home-page "http://gegl.org/babl/") (synopsis "Image pixel format conversion library") @@ -83,26 +83,27 @@ provided as well as the framework to add new color models and data types.") (patches (search-patches "gegl-CVE-2012-4433.patch")))) (build-system gnu-build-system) (arguments - `(;; More than just the one test disabled below now fails; disable them + '(;; More than just the one test disabled below now fails; disable them ;; all according to the rationale given below. #:tests? #f + #:configure-flags '("LDFLAGS=-lm") #:phases - (alist-cons-before - 'build 'pre-build - (lambda _ - ;; This test program seems to crash on exit. Specifically, whilst - ;; g_object_unreffing bufferA and bufferB - This seems to be a bug - ;; in the destructor. This is just a test program so will not have - ;; any wider effect, although might be hiding another problem. - ;; According to advice received on irc.gimp.org#gegl although 0.2.0 - ;; is the latest released version, any bug reports against it will - ;; be ignored. So we are on our own. - (substitute* "tools/img_cmp.c" - (("g_object_unref \\(buffer.\\);") "")) + (modify-phases %standard-phases + (add-before 'build 'pre-build + (lambda _ + ;; This test program seems to crash on exit. Specifically, whilst + ;; g_object_unreffing bufferA and bufferB - This seems to be a bug + ;; in the destructor. This is just a test program so will not have + ;; any wider effect, although might be hiding another problem. + ;; According to advice received on irc.gimp.org#gegl although 0.2.0 + ;; is the latest released version, any bug reports against it will + ;; be ignored. So we are on our own. + (substitute* "tools/img_cmp.c" + (("g_object_unref \\(buffer.\\);") "")) - (substitute* "tests/compositions/Makefile" - (("/bin/sh") (which "sh")))) - %standard-phases))) + (substitute* "tests/compositions/Makefile" + (("/bin/sh") (which "sh"))) + #t))))) (inputs `(("babl" ,babl) ("glib" ,glib) diff --git a/gnu/packages/glib.scm b/gnu/packages/glib.scm index 926703e159..c5c48731fe 100644 --- a/gnu/packages/glib.scm +++ b/gnu/packages/glib.scm @@ -283,7 +283,7 @@ shared NFS home directories.") "GLib provides data structure handling for C, portability wrappers, and interfaces for such runtime functionality as an event loop, threads, dynamic loading, and an object system.") - (home-page "http://developer.gnome.org/glib/") + (home-page "https://developer.gnome.org/glib/") (license license:lgpl2.0+))) ; some files are under lgpl2.1+ (define gobject-introspection diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm index b334d7cbc0..7133a61d86 100644 --- a/gnu/packages/gnome.scm +++ b/gnu/packages/gnome.scm @@ -141,7 +141,7 @@ (define-public brasero (package (name "brasero") - (version "3.12.1") + (version "3.12.2") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -149,7 +149,7 @@ name "-" version ".tar.xz")) (sha256 (base32 - "09vi2hyhl0bz7imv3ky6h7x5m3d546n968wcghydwrkvwm9ylpls")))) + "0h90y674j26rvjahb8cc0w79zx477rb6zaqcj26wzvq8kmpic8k8")))) (build-system glib-or-gtk-build-system) (arguments `(#:configure-flags (list @@ -165,7 +165,7 @@ (lambda* (#:key inputs #:allow-other-keys) (substitute* "plugins/growisofs/burn-growisofs.c" (("\"growisofs") (string-append "\"" (which "growisofs")))) - #t ))))) + #t))))) (propagated-inputs `(("hicolor-icon-theme" ,hicolor-icon-theme))) (native-inputs @@ -345,6 +345,13 @@ formats like PNG, SVG, PDF and EPS.") ;; The ca-certificates.crt is not available in the build ;; environment. (setenv "SSL_CERT_FILE" "/dev/null") + #t)) + (add-before 'check 'disable-failing-tests + (lambda _ + ;; The PicasaWeb API tests fail with gnome-online-accounts@3.24.2. + ;; They have been removed in libgdata 0.17.6, so just do the same. + (substitute* "gdata/tests/Makefile" + (("picasaweb\\$\\(EXEEXT\\) ") "")) #t))))) (native-inputs `(("glib:bin" ,glib "bin") @@ -578,7 +585,7 @@ and keep up to date translations of documentation.") `(("p11-kit" ,p11-kit) ("glib" ,glib) ("gtk+" ,gtk+))) - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (synopsis "Libraries for displaying certificates and accessing key stores") (description "The GCR package contains libraries used for displaying certificates and @@ -609,7 +616,7 @@ GNOME Desktop.") (propagated-inputs ;; Referred to in .h files and .pc. `(("glib" ,glib))) - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (synopsis "Accessing passwords from the GNOME keyring") (description "Client library to access passwords from the GNOME keyring.") @@ -673,7 +680,7 @@ GNOME Desktop.") ("libxslt" ,libxslt) ;for documentation ("docbook-xml" ,docbook-xml-4.2) ("docbook-xsl" ,docbook-xsl))) - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (synopsis "Daemon to store passwords and encryption keys") (description "gnome-keyring is a program that keeps passwords and other secrets for @@ -744,7 +751,7 @@ forgotten when the session ends.") ("pkg-config" ,pkg-config) ("xmllint" ,libxml2))) (home-page - "http://www.gnome.org/projects/evince/") + "https://www.gnome.org/projects/evince/") (synopsis "GNOME's document viewer") (description "Evince is a document viewer for multiple document formats. It @@ -843,7 +850,7 @@ GNOME and KDE desktops to the icon names proposed in the specification.") `(("icon-naming-utils" ,icon-naming-utils) ("intltool" ,intltool) ("pkg-config" ,pkg-config))) - (home-page "http://art.gnome.org/") + (home-page "https://art.gnome.org/") (synopsis "GNOME icon theme") (description @@ -1142,7 +1149,7 @@ XML/CSS rendering engine.") `(("gdk-pixbuf" ,gdk-pixbuf) ("glib" ,glib) ("libxml2" ,libxml2))) - (home-page "http://www.gnome.org/projects/libgsf") + (home-page "https://www.gnome.org/projects/libgsf") (synopsis "GNOME's Structured File Library") (description "Libgsf aims to provide an efficient extensible I/O abstraction for @@ -1377,7 +1384,7 @@ is intended for user preferences; not arbitrary data storage.") (string-append "INTLTOOL_" tool " = intltool-" (string-downcase tool) "\n"))) #t))))) - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (synopsis "Base MIME and Application database for GNOME") (description "GNOME Mime Data is a module which contains the base MIME and Application database for GNOME. The data stored by this module is @@ -1832,7 +1839,7 @@ Hints specification (EWMH).") (define-public gnumeric (package (name "gnumeric") - (version "1.12.34") + (version "1.12.35") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -1840,7 +1847,7 @@ Hints specification (EWMH).") name "-" version ".tar.xz")) (sha256 (base32 - "09f7h4lvwzyl0amd3axapwbsrnrvvpwxyhs540jlrv425n0j0j8b")))) + "02kcq2af16m9mlzgkbdzswhw0nl6zf01dmvsfq3shy1mab7f7cbp")))) (build-system glib-or-gtk-build-system) (arguments `(;; The gnumeric developers don't worry much about failing tests. @@ -1995,7 +2002,7 @@ passwords in the GNOME keyring.") ("gobject-introspection" ,gobject-introspection))) ; for gir tests (propagated-inputs `(("glib" ,glib))) ; required by libvala-0.26.pc - (home-page "http://live.gnome.org/Vala/") + (home-page "https://live.gnome.org/Vala/") (synopsis "Compiler for the GObject type system") (description "Vala is a programming language that aims to bring modern programming @@ -2029,7 +2036,7 @@ libraries written in C.") `(("gtk+" ,gtk+) ;required by vte-2.91.pc ("gnutls" ,gnutls) ;ditto ("pcre2" ,pcre2))) ;ditto - (home-page "http://www.gnome.org/") + (home-page "https://www.gnome.org/") (synopsis "Virtual Terminal Emulator") (description "VTE is a library (libvte) implementing a terminal emulator widget for @@ -2299,7 +2306,7 @@ indicators etc).") `(("python" ,python-2) ("python2-pygtk" ,python2-pygtk) ("librsvg" ,librsvg))) - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (synopsis "Python bindings to librsvg") (description "This packages provides Python bindings to librsvg, the SVG rendering @@ -2350,7 +2357,7 @@ library.") ("gnutls" ,gnutls) ("gsettings-desktop-schemas" ,gsettings-desktop-schemas) ("p11-kit" ,p11-kit))) - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (synopsis "Network-related GIO modules") (description "This package contains various network related extensions for the GIO @@ -3020,7 +3027,7 @@ services for numerous locations.") ("librsvg" ,librsvg) ("xf86-input-wacom" ,xf86-input-wacom) ("network-manager" ,network-manager))) - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (synopsis "GNOME settings daemon") (description "This package contains the daemon responsible for setting the various @@ -3343,7 +3350,7 @@ GL based interactive canvas library.") ("cairo" ,cairo) ("gtk+3" ,gtk+) ("glib" ,glib))) - (home-page "http://projects.gnome.org/libchamplain/") + (home-page "https://projects.gnome.org/libchamplain/") (synopsis "C library providing a ClutterActor to display maps") (description "libchamplain is a C library providing a ClutterActor to display maps. @@ -3512,7 +3519,7 @@ as possible!") (variable "GRL_PLUGIN_PATH") (files (list (string-append "lib/grilo-" (version-major+minor version))))))) - (home-page "http://live.gnome.org/Grilo") + (home-page "https://live.gnome.org/Grilo") (synopsis "Framework for discovering and browsing media") (description "Grilo is a framework focused on making media discovery and browsing easy @@ -3565,7 +3572,7 @@ for application developers.") ;; with: "assertion failed: (source)". Outside of the build container, ;; most tests succeed. #:tests? #f)) - (home-page "http://live.gnome.org/Grilo") + (home-page "https://live.gnome.org/Grilo") (synopsis "Plugins for the Grilo media discovery library") (description "Grilo is a framework focused on making media discovery and browsing easy @@ -4087,7 +4094,7 @@ a secret password store, an adblocker, and a modern UI.") (define-public epiphany (package (name "epiphany") - (version "3.24.2") + (version "3.24.3") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -4095,7 +4102,7 @@ a secret password store, an adblocker, and a modern UI.") name "-" version ".tar.xz")) (sha256 (base32 - "13f5h7mbxdyjf93jp46hiaxsrngpr6frgf69d8iza7arc060vg2s")))) + "0m51cclpnb7lxk8w526rriyb2bi3aj17fbcvikhkg7qd65v1dxgy")))) (build-system glib-or-gtk-build-system) (arguments ;; FIXME: tests run under Xvfb, but fail with: @@ -4564,7 +4571,7 @@ configuration program to choose applications starting on login.") `(("gtk+" ,gtk+) ("readline" ,readline))) (synopsis "Javascript bindings for GNOME") - (home-page "http://live.gnome.org/Gjs") + (home-page "https://live.gnome.org/Gjs") (description "Gjs is a javascript binding for GNOME. It's mainly based on spidermonkey javascript engine and the GObject introspection framework.") @@ -4573,7 +4580,7 @@ javascript engine and the GObject introspection framework.") (define-public gedit (package (name "gedit") - (version "3.22.0") + (version "3.22.1") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -4581,11 +4588,10 @@ javascript engine and the GObject introspection framework.") name "-" version ".tar.xz")) (sha256 (base32 - "0i9z5d31vibb3dd329gwvyga38zq5k1a2glcdq7m93ycbl5mlfq6")))) + "0as9r5zvnyrxh699q6jnd0p9ddqy5qamfbxggpdjzagzixhw6yxa")))) (build-system glib-or-gtk-build-system) (arguments - `(#:configure-flags '("--disable-spell") ; XXX: gspell not packaged yet - #:phases + `(#:phases (modify-phases %standard-phases (add-after 'install 'wrap-gedit @@ -4611,6 +4617,7 @@ javascript engine and the GObject introspection framework.") ("pkg-config" ,pkg-config))) (inputs `(("glib" ,glib) + ("gspell" ,gspell) ("gtk+" ,gtk+) ("gtksourceview" ,gtksourceview) ("libpeas" ,libpeas) @@ -4651,7 +4658,7 @@ powerful general purpose text editor.") `(("libnotify" ,libnotify) ("webkitgtk" ,webkitgtk))) (synopsis "Display graphical dialog boxes from shell scripts") - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (description "Zenity is a rewrite of gdialog, the GNOME port of dialog which allows you to display dialog boxes from the commandline and shell scripts.") @@ -4660,7 +4667,7 @@ to display dialog boxes from the commandline and shell scripts.") (define-public mutter (package (name "mutter") - (version "3.24.2") + (version "3.24.4") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -4668,7 +4675,7 @@ to display dialog boxes from the commandline and shell scripts.") name "-" version ".tar.xz")) (sha256 (base32 - "043q3384vwrkjdfhbwn9pwdml6z0g0ad0cj2fjnjzg6402i67071")))) + "1slspy5krbqfvnma72lvdnxjf8ag2cvxssa8bvi7y3xxy7xv603k")))) ;; NOTE: Since version 3.21.x, mutter now bundles and exports forked ;; versions of cogl and clutter. As a result, many of the inputs, ;; propagated-inputs, and configure flags used in cogl and clutter are @@ -4749,7 +4756,7 @@ to display dialog boxes from the commandline and shell scripts.") ("xkeyboard-config" ,xkeyboard-config) ("zenity" ,zenity))) (synopsis "Window and compositing manager") - (home-page "http://www.gnome.org") + (home-page "https://www.gnome.org") (description "Mutter is a window and compositing manager that displays and manages your desktop via OpenGL. Mutter combines a sophisticated display engine using the @@ -4760,7 +4767,7 @@ window manager.") (define-public gnome-online-accounts (package (name "gnome-online-accounts") - (version "3.24.1") + (version "3.24.2") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -4768,7 +4775,7 @@ window manager.") name "-" version ".tar.xz")) (sha256 (base32 - "0lgniqmkr6ffdw3kcqd34lvp969j2q2qzcy30zkzl5c09r7anc0a")))) + "1fmgywfcvlb5sa0slxxlg80gafiaal8vnq6h5lcybqa12lnxa2mp")))) (build-system glib-or-gtk-build-system) (native-inputs `(("glib:bin" ,glib "bin") ; for glib-compile-schemas, etc. @@ -5034,7 +5041,7 @@ users.") ("util-linux" ,util-linux) ("elogind" ,elogind))) (synopsis "Network connection manager") - (home-page "http://www.gnome.org/projects/NetworkManager/") + (home-page "https://www.gnome.org/projects/NetworkManager/") (description "NetworkManager is a system network service that manages your network devices and connections, attempting to keep active network connectivity when @@ -5097,7 +5104,7 @@ services.") ("jansson" ,jansson) ; for team support ("modem-manager" ,modem-manager))) (synopsis "Applet for managing network connections") - (home-page "http://www.gnome.org/projects/NetworkManager/") + (home-page "https://www.gnome.org/projects/NetworkManager/") (description "This package contains a systray applet for NetworkManager. It displays the available networks and allows users to easily switch between them.") @@ -5198,7 +5205,7 @@ libxml2.") ("libcanberra" ,libcanberra) ("linux-pam" ,linux-pam))) (synopsis "Display manager for GNOME") - (home-page "http://wiki.gnome.org/Projects/GDM/") + (home-page "https://wiki.gnome.org/Projects/GDM/") (description "GNOME Display Manager is a system service that is responsible for providing graphical log-ins and managing local and remote displays.") @@ -5491,7 +5498,7 @@ easy, safe, and automatic.") (define-public tracker (package (name "tracker") - (version "1.12.0") + (version "1.12.2") (source (origin (method url-fetch) (uri (string-append "mirror://gnome/sources/" name "/" @@ -5499,7 +5506,7 @@ easy, safe, and automatic.") name "-" version ".tar.xz")) (sha256 (base32 - "0vsrzzkcfvmylhpk1ww6xdx8z9sgjs0gn74gz82qngjyq3c3s6c3")))) + "1zdzh8l5ahi906i40i4pqw2cs1hwrl6l9a7fp344a3idk3pl5szb")))) (build-system glib-or-gtk-build-system) (native-inputs `(("gnome-common" ,gnome-common) @@ -6512,18 +6519,19 @@ that support the Assistive Technology Service Provider Interface (AT-SPI).") "/lib/aspell")) #t))))) (inputs - `(("enchant" ,enchant) - ("iso-codes" ,iso-codes) - ("gtk+" ,gtk+) - ("glib" ,glib))) + `(("gtk+" ,gtk+) + ("glib" ,glib) + ("iso-codes" ,iso-codes))) (native-inputs `(("glib" ,glib "bin") ("pkg-config" ,pkg-config) ("xmllint" ,libxml2) ;; For tests. - ("xorg-server" ,xorg-server) - ("aspell-dict-en" ,aspell-dict-en))) + ("aspell-dict-en" ,aspell-dict-en) + ("xorg-server" ,xorg-server))) + (propagated-inputs + `(("enchant" ,enchant))) ; enchant.pc is required by gspell-1.pc (home-page "https://wiki.gnome.org/Projects/gspell") (synopsis "GNOME's alternative spell checker") (description diff --git a/gnu/packages/gnunet.scm b/gnu/packages/gnunet.scm index 9ca2d9502b..497afaf668 100644 --- a/gnu/packages/gnunet.scm +++ b/gnu/packages/gnunet.scm @@ -5,7 +5,7 @@ ;;; Copyright © 2015 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2016 Mark H Weaver <mhw@netris.org> -;;; Copyright © 2016, 2017 ng0 <ng0@no-reply.infotropique.org> +;;; Copyright © 2016, 2017 ng0 <ng0@infotropique.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -186,14 +186,14 @@ and support for SSL3 and TLS.") (define-public gnurl (package (name "gnurl") - (version "7.54.1") + (version "7.55.0") (source (origin (method url-fetch) (uri (string-append "https://gnunet.org/sites/default/files/" name "-" version ".tar.bz2")) (sha256 (base32 - "0szbj352h95sgc9kbx9wzkgjksmg3g5k6cvlc7hz3wrbdh5gb0a4")))) + "0i9bik76rbyag3mbxbk8j383iaxs5v7lmjkn4v36ascl6bdks6vn")))) (build-system gnu-build-system) (outputs '("out" "doc")) ; 1.5 MiB of man3 pages diff --git a/gnu/packages/gnupg.scm b/gnu/packages/gnupg.scm index ca4f1d34f2..fd850c0469 100644 --- a/gnu/packages/gnupg.scm +++ b/gnu/packages/gnupg.scm @@ -203,14 +203,14 @@ compatible to GNU Pth.") (define-public gnupg (package (name "gnupg") - (version "2.1.22") + (version "2.1.23") (source (origin (method url-fetch) (uri (string-append "mirror://gnupg/gnupg/gnupg-" version ".tar.bz2")) (sha256 (base32 - "1msazgy1q1pp7y2xr46z0il4pfzmzgzkp7v0hv5cz4hvkspnywa6")))) + "0xqd5nm4j3w9lwk35vg57gl2i8bfkmx7d24i44gkbscm2lwpci59")))) (build-system gnu-build-system) (native-inputs `(("pkg-config" ,pkg-config))) @@ -229,8 +229,7 @@ compatible to GNU Pth.") ("sqlite" ,sqlite) ("zlib" ,zlib))) (arguments - `(#:configure-flags '("--enable-gpg2-is-gpg" - ;; Otherwise, the test suite looks for the `gpg` + `(#:configure-flags '(;; Otherwise, the test suite looks for the `gpg` ;; executable in its installation directory in ;; /gnu/store before it has been installed. "--enable-gnupg-builddir-envvar") diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm index 0fb25d8432..1daaa79c73 100644 --- a/gnu/packages/gnuzilla.scm +++ b/gnu/packages/gnuzilla.scm @@ -509,52 +509,86 @@ standards.") (mozilla-patch "icecat-CVE-2017-5470-pt20.patch" "38273203b827" "12p9r4spdp09d6ic9sqspvdr50lmc1p86ydz2fxdifb1f95njhx0") (mozilla-patch "icecat-bug-1357022.patch" "5bd51bc3f587" "0z5drxpfjvb7s43qgcr404h8ckchgakwwwi4nxpx2i653w22a743") (mozilla-patch "icecat-bug-1318845.patch" "512efd480dac" "13cmqap795ayh6gh3b5bc6002pz0wp92qngs7fh5qqklc7a0gkzv") - (mozilla-patch "icecat-bug-1371586.patch" "d0c92199b9ed" "0qmsm7d4h6ysx3an247kpx9qpksfms7hrjgpdrghdbxla1hc4nc9") + (mozilla-patch "icecat-CVE-2017-7798-pt1.patch" "d0c92199b9ed" "0qmsm7d4h6ysx3an247kpx9qpksfms7hrjgpdrghdbxla1hc4nc9") (mozilla-patch "icecat-bug-1364513.patch" "88e9c2137640" "1mh4l745q1wlabn9sz47n0vy3h7c66fcay2b9dwa16iqwvh3lpiw") (mozilla-patch "icecat-bug-1366203.patch" "08dd87b6bb8f" "15bfwfwwd978mlcpk1d6m7506k8c2y402md7wzf6piabxl5kk6cf") - (mozilla-patch "icecat-bug-1368576.patch" "5a51a9ef8149" "0j0f9j0pryv3ik4bizhv8s6rr4dl1mjm01c23msayr0vbnpcagcs") - (mozilla-patch "icecat-bug-1369913.patch" "f47eaebc0c5c" "1b52xm3awpigasaz0hk5b13l7v4ry9vrawf571lzy2wwhphs4nxx") - (mozilla-patch "icecat-bug-1371424.patch" "40ce248a8c15" "1b722fiifr999ga0991cg5mlhidcnvf3zx2aiq5zjaabqn0f4dzk") - (mozilla-patch "icecat-bug-1372112.patch" "0c8359ac6718" "1w0v2p5jnhzvcsx8h1bglwjhp5y5bg1g8pzpvjw7pg1wlq2frccr") - (mozilla-patch "icecat-bug-1354443-pt1.patch" "8c27a68ee87e" "0kn05q8nvp26w5rnj8r0byw89h2awmwn04l9l3xv2i5w2a7zmjzf") - (mozilla-patch "icecat-bug-1354443-pt2.patch" "b2ee0c5466da" "0jgwsppq0606lwg5jk9q69lqa14q3j7h3c7q6mxbz7zqrcg7d0zg") - (mozilla-patch "icecat-bug-1354443-pt3.patch" "25f6ec16e501" "1yqd5ndwgd8x2pj9k2bnaq3rb1g7wikq0ii7l4dm6bqwabi2rdsg") - (mozilla-patch "icecat-bug-1354443-pt4.patch" "30443b4f758e" "0riszl3xnpfq5ffywygrc12nsvx0ffd36d5rf4vp87r8lj3fr55r") - (mozilla-patch "icecat-bug-1354443-pt5.patch" "1b934ab92c59" "114cvfzfxgkwwd4zpnrmm2kx6m94k0b3xcraba9aawwwhdxj6a1d") - (mozilla-patch "icecat-bug-1354443-pt6.patch" "830a345dc0e7" "01riivv033w3mr8b2myaw38rz2za1bdlhybny737ly68hhc67xdz") - (mozilla-patch "icecat-bug-1365189.patch" "5c26df489768" "1fdw4zbn0ilfghanxky4y7qcmkpkks2q1aqkzv26dnhhrr8350a1") - (mozilla-patch "icecat-bug-1365875.patch" "f21e4d78a0a8" "0szsc3zm3wgrw8pxm0rz54whkrc14yy4d8vwmxgqsdns43qjgkpk") - (mozilla-patch "icecat-bug-1346590.patch" "f19b6c6a0c6c" "0wkr010qnh4127z1j7fp45sqdk2da9x7j2k405r0x5bgqdd09qzp") - (mozilla-patch "icecat-bug-1376087.patch" "8353a3fa4106" "0kzs8pl6spjwgdsmiw702zvbvz73ng9zf184clsfr82l8kmggbgw") - (mozilla-patch "icecat-bug-1371889.patch" "b38fed9a9772" "14vzsldlv4hjpxgnl6fjjbzhgcwsmd52v06cgmv0a7y3lnggj3hp") - (mozilla-patch "icecat-bug-1322896.patch" "c254d3cc826c" "0pixwr18qik87c8qf4irg6hdffd8rbwpng73jxg05h7s827nfw3g") - (mozilla-patch "icecat-bug-1368652.patch" "6356dbf20658" "0a0hsxkik7ysfa48w8k21lidaabwpmxi1d3214r5zqkqqfhn9qjm") + (mozilla-patch "icecat-CVE-2017-7779-pt01.patch" "5a51a9ef8149" "0j0f9j0pryv3ik4bizhv8s6rr4dl1mjm01c23msayr0vbnpcagcs") + (mozilla-patch "icecat-CVE-2017-7779-pt02.patch" "f47eaebc0c5c" "1b52xm3awpigasaz0hk5b13l7v4ry9vrawf571lzy2wwhphs4nxx") + (mozilla-patch "icecat-CVE-2017-7779-pt03.patch" "40ce248a8c15" "1b722fiifr999ga0991cg5mlhidcnvf3zx2aiq5zjaabqn0f4dzk") + (mozilla-patch "icecat-CVE-2017-7798-pt2.patch" "0c8359ac6718" "1w0v2p5jnhzvcsx8h1bglwjhp5y5bg1g8pzpvjw7pg1wlq2frccr") + (mozilla-patch "icecat-CVE-2017-7779-pt04.patch" "8c27a68ee87e" "0kn05q8nvp26w5rnj8r0byw89h2awmwn04l9l3xv2i5w2a7zmjzf") + (mozilla-patch "icecat-CVE-2017-7779-pt05.patch" "b2ee0c5466da" "0jgwsppq0606lwg5jk9q69lqa14q3j7h3c7q6mxbz7zqrcg7d0zg") + (mozilla-patch "icecat-CVE-2017-7779-pt06.patch" "25f6ec16e501" "1yqd5ndwgd8x2pj9k2bnaq3rb1g7wikq0ii7l4dm6bqwabi2rdsg") + (mozilla-patch "icecat-CVE-2017-7779-pt07.patch" "30443b4f758e" "0riszl3xnpfq5ffywygrc12nsvx0ffd36d5rf4vp87r8lj3fr55r") + (mozilla-patch "icecat-CVE-2017-7779-pt08.patch" "1b934ab92c59" "114cvfzfxgkwwd4zpnrmm2kx6m94k0b3xcraba9aawwwhdxj6a1d") + (mozilla-patch "icecat-CVE-2017-7779-pt09.patch" "830a345dc0e7" "01riivv033w3mr8b2myaw38rz2za1bdlhybny737ly68hhc67xdz") + (mozilla-patch "icecat-CVE-2017-7786.patch" "5c26df489768" "1fdw4zbn0ilfghanxky4y7qcmkpkks2q1aqkzv26dnhhrr8350a1") + (mozilla-patch "icecat-CVE-2017-7791.patch" "f21e4d78a0a8" "0szsc3zm3wgrw8pxm0rz54whkrc14yy4d8vwmxgqsdns43qjgkpk") + (mozilla-patch "icecat-CVE-2017-7779-pt10.patch" "f19b6c6a0c6c" "0wkr010qnh4127z1j7fp45sqdk2da9x7j2k405r0x5bgqdd09qzp") + (mozilla-patch "icecat-CVE-2017-7784.patch" "8353a3fa4106" "0kzs8pl6spjwgdsmiw702zvbvz73ng9zf184clsfr82l8kmggbgw") + (mozilla-patch "icecat-bug-1371889.patch" "b38fed9a9772" "14vzsldlv4hjpxgnl6fjjbzhgcwsmd52v06cgmv0a7y3lnggj3hp"); XXX backed out upstream + (mozilla-patch "icecat-CVE-2017-7787.patch" "c254d3cc826c" "0pixwr18qik87c8qf4irg6hdffd8rbwpng73jxg05h7s827nfw3g") + (mozilla-patch "icecat-CVE-2017-7792.patch" "6356dbf20658" "0a0hsxkik7ysfa48w8k21lidaabwpmxi1d3214r5zqkqqfhn9qjm") (mozilla-patch "icecat-bug-1358073.patch" "8d6e685d061b" "0430gwg7zzbg0q9w2m04s5ljh47bc8x1gxvmkzbn23bh1wy4d4sq") (mozilla-patch "icecat-bug-1370869.patch" "3b8fde840188" "0vkymvzkfpzpg86npa5vpvvf564k18hkfdz8857rl0z4dp4rybzx") - (mozilla-patch "icecat-bug-1369994.patch" "267b649087ff" "04wzazdm0kvbfcgmlhx8qs1ibqn8sbvqdsd237rja5wpr761xxf1") + (mozilla-patch "icecat-CVE-2017-7779-pt11.patch" "267b649087ff" "04wzazdm0kvbfcgmlhx8qs1ibqn8sbvqdsd237rja5wpr761xxf1") (mozilla-patch "icecat-bug-1354796.patch" "69d1a9de76b9" "1q0p4kf8pvnkwwff3lz526pjj15a25pf724awblkcnzamwbib5ns") (mozilla-patch "icecat-bug-1363027.patch" "c5eaa2d51b9f" "1xyj5n1vqhscc369q6wxibs2igbilaiwyc0q9cq64j2qx8q0yqah") (mozilla-patch "icecat-bug-1364189.patch" "852a7781259e" "12y344p54avz5mrqirq14zp4csx8ydilnjv9nsw48kpa9y0l5xsg") (mozilla-patch "icecat-bug-1342417.patch" "37ccdc5fff2b" "1acywg8girplbs7wjrjbvkximhiyizddmnkkq1ldd0l3qbx9nihc") - (mozilla-patch "icecat-bug-1362924-pt1.patch" "057ed884ecb0" "1m49bqkq5lzc2j59wgwy0gbzvqj50p9lfn7cbc2n01v6d7m8rc2j") - (mozilla-patch "icecat-bug-1362924-pt2.patch" "dd7ed649b82f" "1fama1l2vx4p6ahhrsrpysfbk9nh5gwbi4pdnclpyxd42idsdqxs") - (mozilla-patch "icecat-bug-1353312.patch" "731958f7ff4d" "0l3i3mkb6rslnjag3caf4xyhjzxn91wfs0g6dbika4sxnhfs5d4i") + (mozilla-patch "icecat-CVE-2017-7779-pt12.patch" "057ed884ecb0" "1m49bqkq5lzc2j59wgwy0gbzvqj50p9lfn7cbc2n01v6d7m8rc2j") + (mozilla-patch "icecat-CVE-2017-7779-pt13.patch" "dd7ed649b82f" "1fama1l2vx4p6ahhrsrpysfbk9nh5gwbi4pdnclpyxd42idsdqxs") + (mozilla-patch "icecat-CVE-2017-7753.patch" "731958f7ff4d" "0l3i3mkb6rslnjag3caf4xyhjzxn91wfs0g6dbika4sxnhfs5d4i") (mozilla-patch "icecat-bug-1364870.patch" "de8deecbcb02" "048ic1vk7fd7wxqjgjqlnb7kv03ynaa4wkrk0ka8m39pkjh3yyxj") (mozilla-patch "icecat-bug-1365333.patch" "e3d13b270f45" "0jr8hpxpmfgrbh09xd9nj597cdnc6kl6gs5nir4zlzbbn8kp3429") (mozilla-patch "icecat-bug-1372063.patch" "58a144bf9677" "12y8vikbzcfcfiidjdq67dvdhhvylx68wdgnypsafrd1q8dx9jza") (mozilla-patch "icecat-bug-1373970.patch" "8321ef71adb5" "1wk8kq9n2vhqlinvvw01avv3c7qj0k3qnn7dj0whnl08a5yrqhpl") (mozilla-patch "icecat-bug-1338646.patch" "322c18d011af" "1yqb7zmjz211ryb98pjj7axbj6bwkj63rmfyifsybdy3zpb4nf48") - (mozilla-patch "icecat-bug-1371283.patch" "f9bc084fbb8a" "1ssml15yzx9s0wraq4n0xvq5bw7j8xq0p2y39h8j3f1c448n0j50") + (mozilla-patch "icecat-CVE-2017-7779-pt14.patch" "f9bc084fbb8a" "1ssml15yzx9s0wraq4n0xvq5bw7j8xq0p2y39h8j3f1c448n0j50") (mozilla-patch "icecat-bug-1359477.patch" "9b70b5b852e4" "0z2bi7w46g7mm8msav8vz28mgvnv21z3a5876n9gpw317gns4d6a") - (mozilla-patch "icecat-bug-1366903.patch" "6785c2a852da" "0p9jr171qi59scr5lrj6g0mv8mgm1i1wglr3jd16xywb0ymynnn5") - (mozilla-patch "icecat-bug-1368105.patch" "11c8e23f0fd7" "0zcikv6dn7biii4gspv2kfvma5hc76hk86jahm3zl2zlkk8ikfm9") + (mozilla-patch "icecat-CVE-2017-7779-pt15.patch" "6785c2a852da" "0p9jr171qi59scr5lrj6g0mv8mgm1i1wglr3jd16xywb0ymynnn5") + (mozilla-patch "icecat-CVE-2017-7779-pt16.patch" "11c8e23f0fd7" "0zcikv6dn7biii4gspv2kfvma5hc76hk86jahm3zl2zlkk8ikfm9") (mozilla-patch "icecat-bug-1355168.patch" "f45ba43512ad" "0p28q5acns5zjj7ks2x5lrmwzzps741507sq31xvrpzan5yav37x") (mozilla-patch "icecat-bug-1308820.patch" "e9a10fac6aae" "1s2zaka6ik1rmylamyh38vsqnqlblbqdhjpp0cv08fjb9flh5sbw") (mozilla-patch "icecat-bug-1305036.patch" "c42a348f2ed0" "1pz7qbdv9xvyd1dy7g9h047c0gmrgp5qdy2360qjk6879n74h1zb") (mozilla-patch "icecat-bug-1342913.patch" "f02db36497d2" "0g1kg418l1cibh5k1sjqj2vs2jcblpbn7b06qazk2kzcg70vf5gv") - (mozilla-patch "icecat-bug-1374047.patch" "0a44ed156da5" "1y8z1czm7f91p9bpd32b9k43nl0b9g4fzwv4w0khby9y38xgvcbs") - (mozilla-patch "icecat-bug-1371259.patch" "0a86729d653e" "0wyh7qskjwq9274d25p2ajylaab5mj5h8by58rz9lxsz06zrnz9f") - (mozilla-patch "icecat-bug-1378826.patch" "98ff43fb228a" "0ih0nsmk8rzdrajzlnryqiqb71jg7v4p71hfla2hrlvn41r3709m"))) + (mozilla-patch "icecat-CVE-2017-7800.patch" "0a44ed156da5" "1y8z1czm7f91p9bpd32b9k43nl0b9g4fzwv4w0khby9y38xgvcbs") + (mozilla-patch "icecat-CVE-2017-7801.patch" "0a86729d653e" "0wyh7qskjwq9274d25p2ajylaab5mj5h8by58rz9lxsz06zrnz9f") + (mozilla-patch "icecat-CVE-2017-7779-pt17.patch" "98ff43fb228a" "0ih0nsmk8rzdrajzlnryqiqb71jg7v4p71hfla2hrlvn41r3709m") + (mozilla-patch "icecat-CVE-2017-7802.patch" "09f62bfc5800" "07q18qzxja1cywihr5vhhws328zghrwc6ldx8kcsawia1r1i5gp7") + (mozilla-patch "icecat-bug-1321803-pt1.patch" "cfb75012cfbd" "1bwwfm1vhr7ddsvmi1cinwdq6f4nd71fkd9lbnlhmh4ix63gz2yl") + (mozilla-patch "icecat-bug-1321803-pt2.patch" "0f3f951461d7" "1rp1cj4c0dkhd4pda88kx499h7ycw3037yh2khff78y61ckg2a85") + (mozilla-patch "icecat-bug-1321803-pt3.patch" "b654a39db998" "1v79mh8lrnn7q40c8zj24byrqyw3x8fwcw25w90wqajnbf0ixskx") + (mozilla-patch "icecat-bug-1334338.patch" "1be1fe3c9622" "1mhd9nyp8map76hgwrhm1k955fz8y5iszdvvgrv3z1r1h77k0nz0") + (mozilla-patch "icecat-bug-1379538.patch" "8fa66bc91b07" "1l44rwkdrv9y41nfb9h3fkykk3ci7xclp6rfwbbzm4293l00adrd") + (mozilla-patch "icecat-CVE-2017-7779-pt18.patch" "7c095249ef8a" "05dbvxlmh7jljjmis540nfgk2nn968prmxrm96674avn33989sqy") + (mozilla-patch "icecat-bug-1073952.patch" "06db7fb30689" "19qf9lrwy48fjzz3wpjfxsgqab68dnlci8jrwsljhpy6787xwxg2") + (mozilla-patch "icecat-CVE-2017-7803.patch" "c52d8ce8d5df" "03l9hk278b9mw75rxpn2ay1slyz21axa2l7dfxwkvj5vdn7ykdbj") + (mozilla-patch "icecat-CVE-2017-7779-pt19.patch" "d68c9edf056f" "0zfz0l9m675n4vvm87n8g3bdhhysla4qnywli5kwjy4krj9kq6qa") + (mozilla-patch "icecat-CVE-2017-7779-pt20.patch" "5dd82ab194b9" "10mdzwxibnmqs7y5arf8sjnva31i5vhbprlc63n74h8gh8k5kdlp") + (mozilla-patch "icecat-CVE-2017-7779-pt21.patch" "8fc70b2b57a8" "0yszfmb47x3rrzn5wncv112c1b7xw11j62adx4f7950fdj7zqr32") + (mozilla-patch "icecat-bug-1379444.patch" "47dd26630291" "0r2rc634sr4a5mfc53p1wx8d0zm6dsxiw2vzc7l89mac0d0cmi5n") + (mozilla-patch "icecat-bug-1372467.patch" "0f906e04a41d" "0f2zdpnb23yg3v5f1ha24cmagcwa01kf2xz1l2lcws4ss1w5b4a9") + (mozilla-patch "icecat-bug-1372383.patch" "56349462ff47" "17gc7kf0i367c1yh2w1701k8snvdm04nznc3q3yxdl3wxkh3c3sb") + (mozilla-patch "icecat-CVE-2017-7779-pt22.patch" "7b79969a18ee" "0ixycxbjh0wmihrhzpyjbkcnvwwrzs3ffb0lymzvqnr90yxvxhyy") + (mozilla-patch "icecat-CVE-2017-7779-pt23.patch" "f0ab032fd674" "04wc4i94cfj2vcawrv7hgbb70fkxggi7s6srk3i184686rczzpyw") + (mozilla-patch "icecat-bug-1308908.patch" "48a89721d076" "01gvdzy6whp2dqmjvx49f4mvl75dhjgr8dvx71pg4sx3xmdbkzyq") + (mozilla-patch "icecat-bug-1347667.patch" "ef1d17821945" "0s6gaarnvnibgf9x0xqcymaqc63lnbh9fm2g33i8cpp1xjhmywcv") + (mozilla-patch "icecat-bug-1367128-pt1.patch" "5a0f69630b03" "1vqbwmy58qxwfaisq0dxvvbsd5w5i4yb691i78gw1dv7kgf523qy") + (mozilla-patch "icecat-bug-1367128-pt2.patch" "7db52eca97b2" "081p8izjxscylfs090c9mzlmfvpdfvg1qsf5rik30hvifcpxp6lq") + (mozilla-patch "icecat-bug-1367128-pt3.patch" "c448439eb5dc" "18gp7mg3zh9dxi1300mcm0zk67nlmvp5q50gnyc1v2sv0gs6fdfb") + (mozilla-patch "icecat-bug-1377016.patch" "319a986ae1f4" "1dlmrklkpx42c72pblpw1fi91dhqarqyl3ldnd4943x2hsy3am8k") + (mozilla-patch "icecat-bug-1342433.patch" "09f5bd33efb8" "0dky981ggyc0237mbbyy1chndk0aznkhw00d3lrafiyxsyk6vg3z") + (mozilla-patch "icecat-bug-1359058-pt1.patch" "7ccb26caa02f" "1q97f4qbwjnz6f3g5dcy2v0av9jgbaplaz9pnm5yqdc250f5bhjz") + (mozilla-patch "icecat-bug-1359058-pt2.patch" "a93c1a40f0d8" "0gafbwv2npdjqh41fpvzmzdw3kcw1b41gm3jg9biwqxxwnvqqmfj") + (mozilla-patch "icecat-bug-1382303-pt1.patch" "688c9284fb12" "1rqimwkh8krihabsx7x2awvxls8n9dm2bmbl133fnkp2sjya979w") + (mozilla-patch "icecat-bug-1382303-pt2.patch" "7f969ba7b6e8" "036n1yrmmb6gydxcgyps89g63kj1w2rihk1zsmk7yw3crln226ai") + (mozilla-patch "icecat-bug-1382303-pt3.patch" "7e7b4f104462" "0wkw72qqyql528hvssrqyq72f5csfxa5fgv5s903csh97vawfl7i") + (mozilla-patch "icecat-bug-1383000.patch" "ce65d0641c07" "08bxn3b8rgjhkvdndc7mrd0k1715wbpa5qaxhslxlgj6lpkgk0b1") + (mozilla-patch "icecat-CVE-2017-7807.patch" "a86c77d533ee" "0mzfxpyk4484dk3j1sgplakx39ya0jnp3plxvcmvlc47ry60yq93") + (mozilla-patch "icecat-bug-1346620.patch" "d71000abc9bf" "10d632nq5zbhndrsx2vpkl7jprlnas361n1yh9s9szn8k4mj01rf") + (mozilla-patch "icecat-bug-1381016.patch" "c74486f87dc3" "1l938a2lhrlqfhmgrpypx13v6jw08528m4gnllr2h5sk2x65czip") + (mozilla-patch "icecat-bug-1371657.patch" "20a1a6ad46d5" "17yn5dpymrymgdywah403fzw0p2y9bjkccg0h4d221i3pwns4bcz"))) (modules '((guix build utils))) (snippet '(begin diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm new file mode 100644 index 0000000000..683bfeec66 --- /dev/null +++ b/gnu/packages/graph.scm @@ -0,0 +1,118 @@ +;;; GNU Guix --- Functional package management for GNU +;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net> +;;; +;;; This file is part of GNU Guix. +;;; +;;; GNU Guix is free software; you can redistribute it and/or modify it +;;; under the terms of the GNU General Public License as published by +;;; the Free Software Foundation; either version 3 of the License, or (at +;;; your option) any later version. +;;; +;;; GNU Guix is distributed in the hope that it will be useful, but +;;; WITHOUT ANY WARRANTY; without even the implied warranty of +;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +;;; GNU General Public License for more details. +;;; +;;; You should have received a copy of the GNU General Public License +;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>. + +(define-module (gnu packages graph) + #:use-module (guix download) + #:use-module (guix packages) + #:use-module (guix build-system gnu) + #:use-module (guix build-system python) + #:use-module (guix build-system r) + #:use-module ((guix licenses) #:prefix license:) + #:use-module (gnu packages) + #:use-module (gnu packages gcc) + #:use-module (gnu packages compression) + #:use-module (gnu packages maths) + #:use-module (gnu packages multiprecision) + #:use-module (gnu packages pkg-config) + #:use-module (gnu packages statistics) + #:use-module (gnu packages xml)) + +(define-public igraph + (package + (name "igraph") + (version "0.7.1") + (source + (origin + (method url-fetch) + (uri (string-append "http://igraph.org/nightly/get/c/igraph-" + version ".tar.gz")) + (sha256 + (base32 + "1pxh8sdlirgvbvsw8v65h6prn7hlm45bfsl1yfcgd6rn4w706y6r")))) + (build-system gnu-build-system) + (arguments + `(#:configure-flags + (list "--with-external-glpk" + "--with-external-blas" + "--with-external-lapack"))) + (inputs + `(("gmp" ,gmp) + ("glpk" ,glpk) + ("libxml2" ,libxml2) + ("lapack" ,lapack) + ("openblas" ,openblas) + ("zlib" ,zlib))) + (home-page "http://igraph.org") + (synopsis "Network analysis and visualization") + (description + "This package provides a library for the analysis of networks and graphs. +It can handle large graphs very well and provides functions for generating +random and regular graphs, graph visualization, centrality methods and much +more.") + (license license:gpl2+))) + +(define-public python-igraph + (package (inherit igraph) + (name "python-igraph") + (version "0.7.1.post6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "python-igraph" version)) + (sha256 + (base32 + "0xp61zz710qlzhmzbfr65d5flvsi8zf2xy78s6rsszh719wl5sm5")))) + (build-system python-build-system) + (arguments '()) + (inputs + `(("igraph" ,igraph))) + (native-inputs + `(("pkg-config" ,pkg-config))) + (home-page "http://pypi.python.org/pypi/python-igraph") + (synopsis "Python bindings for the igraph network analysis library"))) + +(define-public r-igraph + (package + (name "r-igraph") + (version "1.1.2") + (source + (origin + (method url-fetch) + (uri (cran-uri "igraph" version)) + (sha256 + (base32 + "1v26wyk52snh8z6m5p7yqwcd9dbqifhm57j112i9x53ppi0npcc9")))) + (build-system r-build-system) + (native-inputs + `(("gfortran" ,gfortran))) + (inputs + `(("gmp" ,gmp) + ("libxml2" ,libxml2))) + (propagated-inputs + `(("r-irlba" ,r-irlba) + ("r-magrittr" ,r-magrittr) + ("r-matrix" ,r-matrix) + ("r-pkgconfig" ,r-pkgconfig))) + (home-page "http://igraph.org") + (synopsis "Network analysis and visualization") + (description + "This package provides routines for simple graphs and network analysis. +It can handle large graphs very well and provides functions for generating +random and regular graphs, graph visualization, centrality methods and much +more.") + (license license:gpl2+))) diff --git a/gnu/packages/gtk.scm b/gnu/packages/gtk.scm index b2aa6ecff5..e942f51719 100644 --- a/gnu/packages/gtk.scm +++ b/gnu/packages/gtk.scm @@ -1355,7 +1355,7 @@ can also be used to document application code.") (inputs ;; Don't propagate GTK+ to reduce "profile pollution". `(("gtk+" ,gtk+-2))) ; required by gtk-engines-2.pc - (home-page "http://live.gnome.org/GnomeArt") + (home-page "https://live.gnome.org/GnomeArt") (synopsis "Theming engines for GTK+ 2.x") (description "This package contains the standard GTK+ 2.x theming engines including @@ -1385,7 +1385,7 @@ Redmond95 and ThinIce.") ("intltool" ,intltool))) (propagated-inputs `(("gtk+" ,gtk+-2))) - (home-page "http://live.gnome.org/GnomeArt") + (home-page "https://live.gnome.org/GnomeArt") (synopsis "Cairo-based theming engine for GTK+ 2.x") (description "Murrine is a cairo-based GTK+ theming engine. It is named after the diff --git a/gnu/packages/image-viewers.scm b/gnu/packages/image-viewers.scm index 644780b5e9..b8a8af9280 100644 --- a/gnu/packages/image-viewers.scm +++ b/gnu/packages/image-viewers.scm @@ -2,7 +2,7 @@ ;;; Copyright © 2013, 2017 Ludovic Courtès <ludo@gnu.org> ;;; Copyright © 2014 Ian Denhardt <ian@zenhack.net> ;;; Copyright © 2015, 2016 Alex Kost <alezost@gmail.com> -;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2017 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2017 ng0 <contact.ng0@cryptolab.net> ;;; Copyright © 2017 Mathieu Othacehe <m.othacehe@gmail.com> @@ -214,7 +214,13 @@ it and customize it for your needs.") (modify-phases %standard-phases (add-after 'unpack 'autogen (lambda _ - (zero? (system* "sh" "autogen.sh"))))))) + (zero? (system* "sh" "autogen.sh")))) + (add-before 'install 'skip-gtk-update-icon-cache + (lambda _ + ;; Don't create 'icon-theme.cache' + (substitute* (find-files "data" "^Makefile$") + (("gtk-update-icon-cache") (which "true"))) + #t))))) (native-inputs `(("automake" ,automake) ("autoconf" ,autoconf) diff --git a/gnu/packages/libreoffice.scm b/gnu/packages/libreoffice.scm index f7775ff4a0..5faa8db7e5 100644 --- a/gnu/packages/libreoffice.scm +++ b/gnu/packages/libreoffice.scm @@ -4,6 +4,7 @@ ;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2017 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be> +;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -695,19 +696,29 @@ Zoner Draw version 4 and 5.") (define-public hunspell (package (name "hunspell") - (version "1.5.4") + (version "1.6.1") (source (origin (method url-fetch) (uri (string-append "https://github.com/hunspell/hunspell/archive/v" version ".tar.gz")) (sha256 (base32 - "0ngwk18dwd8p5a5f20h2jlgrz9wbc1k189mmmprb2zmqwfi02b45")) + "0j9c20sj7bgd6f77193g1ihy8w905byk2gdhdc0r9dsh7irr7x9h")) (file-name (string-append name "-" version ".tar.gz")))) (build-system gnu-build-system) + (native-inputs + `(("autoconf" ,autoconf) + ("automake" ,automake) + ("libtool" ,libtool))) (inputs `(("perl" ,perl))) - (home-page "http://hunspell.sourceforge.net/") + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'unpack 'bootstrap + (lambda _ + (zero? (system* "autoreconf" "-vfi"))))))) + (home-page "https://hunspell.github.io/") (synopsis "Spell checker") (description "Hunspell is a spell checker and morphological analyzer library and program designed for languages with rich morphology and complex diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm index 5a8201e80e..31572bd7dd 100644 --- a/gnu/packages/linux.scm +++ b/gnu/packages/linux.scm @@ -366,8 +366,8 @@ It has been modified to remove all non-free binary blobs.") (define %intel-compatible-systems '("x86_64-linux" "i686-linux")) -(define %linux-libre-version "4.12.4") -(define %linux-libre-hash "13c6ka4fhzi41bjlssbkz84hkag7knqpvfyp2jjhm3wm25r4lhw8") +(define %linux-libre-version "4.12.5") +(define %linux-libre-hash "0kybil1h07fwl9rb0rvmp0w356hi2v1azw603r18vh9x93i8b8xi") (define-public linux-libre (make-linux-libre %linux-libre-version @@ -376,20 +376,20 @@ It has been modified to remove all non-free binary blobs.") #:configuration-file kernel-config)) (define-public linux-libre-4.9 - (make-linux-libre "4.9.40" - "1qaqi2dcydyxw79yj9pa7yxf13ss4rng7bgg0i1dl63c3g7qjgcz" + (make-linux-libre "4.9.41" + "1mkx7rvcny8b0yjkzd8zc53d15h1w8y75m0x6jx0dz3r9y3k0nql" %intel-compatible-systems #:configuration-file kernel-config)) (define-public linux-libre-4.4 - (make-linux-libre "4.4.79" - "03x1nc2fxmh29sf2fbsqzmw8qrdzv5gakr9xrg1shxh31c6xr3xr" + (make-linux-libre "4.4.80" + "1s0d7lsapghgk6jh6igx2fhzj1f6nwmvhqrl2hdwf3dx14z93mp2" %intel-compatible-systems #:configuration-file kernel-config)) (define-public linux-libre-4.1 - (make-linux-libre "4.1.42" - "1g5jhn7cm6ixn7w8ciqm6qgxv7k1jg50v6k05hsvzvrqfpaxqlbz" + (make-linux-libre "4.1.43" + "0ycqmvczj7lm7czilnwpyp14n2lzilyx7m43rsq1qdm2m5rp4q2w" %intel-compatible-systems #:configuration-file kernel-config)) diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index e29a3864df..9096838d6f 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -2,7 +2,7 @@ ;;; Copyright © 2013, 2014, 2015, 2016 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org> ;;; Copyright © 2014, 2016, 2017 John Darrington <jmd@gnu.org> -;;; Copyright © 2014, 2015, 2016 Eric Bavier <bavier@member.fsf.org> +;;; Copyright © 2014, 2015, 2016, 2017 Eric Bavier <bavier@member.fsf.org> ;;; Copyright © 2014 Federico Beffa <beffa@fbengineering.ch> ;;; Copyright © 2014 Mathieu Lirzin <mathieu.lirzin@openmailbox.org> ;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net> @@ -1216,7 +1216,7 @@ September 2004}") (define-public petsc (package (name "petsc") - (version "3.7.2") + (version "3.7.6") (source (origin (method url-fetch) @@ -1224,7 +1224,7 @@ September 2004}") (uri (string-append "http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/" "petsc-lite-" version ".tar.gz")) (sha256 - (base32 "0jfrq6rd4zagw1iimz05m2w91k0jvz3qbik1lk8pqcxw3rvdqk5d")))) + (base32 "1y3f5jjq0v5b62i3sabp4kp5mgfyp3vnk0dxhwkrhpypax77nzxh")))) (build-system gnu-build-system) (native-inputs `(("python" ,python-2) @@ -1247,6 +1247,10 @@ September 2004}") (assoc-ref %build-inputs "superlu") "/include") ,(string-append "--with-superlu-lib=" (assoc-ref %build-inputs "superlu") "/lib/libsuperlu.a")) + #:make-flags + ;; Honor (parallel-job-count) for build. Do not use --with-make-np, + ;; whose value is dumped to $out/lib/petsc/conf/petscvariables. + (list (format #f "MAKE_NP=~a" (parallel-job-count))) #:phases (modify-phases %standard-phases (replace 'configure @@ -1261,13 +1265,17 @@ September 2004}") (format #t "configure flags: ~s~%" flags) (zero? (apply system* "./configure" flags))))) (add-after 'configure 'clean-local-references - (lambda* (#:key inputs outputs #:allow-other-keys) + (lambda* (#:key outputs #:allow-other-keys) (let ((out (assoc-ref outputs "out"))) (substitute* (find-files "." "^petsc(conf|machineinfo).h$") ;; Prevent build directory from leaking into compiled code (((getcwd)) out) ;; Scrub timestamp for reproducibility ((".*Libraries compiled on.*") "")) + (substitute* (find-files "." "petscvariables") + ;; Do not expose build machine characteristics, set to defaults. + (("MAKE_NP = [:digit:]+") "MAKE_NP = 2") + (("NPMAX = [:digit:]+") "NPMAX = 2")) #t))) (add-after 'install 'clean-install ;; Try to keep installed files from leaking build directory names. @@ -1342,16 +1350,15 @@ scientific applications modeled by partial differential equations.") (define-public slepc (package (name "slepc") - (version "3.7.1") + (version "3.7.4") (source (origin (method url-fetch) - (uri (string-append "http://slepc.upv.es/download/download.php?" - "filename=slepc-" version ".tar.gz")) - (file-name (string-append name "-" version ".tar.gz")) + (uri (string-append "http://slepc.upv.es/download/distrib/slepc-" + version ".tar.gz")) (sha256 (base32 - "1hijlmrvxvfqslnx8yydzw5xqbsn1yy02g32w0hln1z3cgr1c0k7")))) + "12pbl8yd6r8k9xjlr1qw25rs0k1acgic7hw1s6l6bhiv9s285drg")))) (build-system gnu-build-system) (native-inputs `(("python" ,python-2))) @@ -1365,6 +1372,8 @@ scientific applications modeled by partial differential equations.") #:configure-flags `(,(string-append "--with-arpack-dir=" (assoc-ref %build-inputs "arpack") "/lib")) + #:make-flags ;honor (parallel-job-count) + `(,(format #f "MAKE_NP=~a" (parallel-job-count))) #:phases (modify-phases %standard-phases (replace 'configure @@ -2415,7 +2424,7 @@ Fresnel integrals, and similar related functions as well.") (define-public suitesparse (package (name "suitesparse") - (version "4.4.3") + (version "4.5.5") (source (origin (method url-fetch) @@ -2424,33 +2433,31 @@ Fresnel integrals, and similar related functions as well.") version ".tar.gz")) (sha256 (base32 - "100hdzr0mf4mzlwnqpmwpfw4pymgsf9n3g0ywb1yps2nk1zbkdy5")))) + "1dnr6pmjzc2qmbkmb4shigx1l74ilf6abn7svyd6brxgvph8vadr")) + (modules '((guix build utils))) + (snippet + ;; Remove bundled metis source + '(delete-file-recursively "metis-5.1.0")))) (build-system gnu-build-system) (arguments - '(#:parallel-build? #f ;cholmod build fails otherwise - #:tests? #f ;no "check" target + '(#:tests? #f ;no "check" target #:make-flags (list "CC=gcc" "BLAS=-lblas" "TBB=-ltbb" - "CHOLMOD_CONFIG=-DNPARTITION" ;required when METIS is not used + "MY_METIS_LIB=-lmetis" (string-append "INSTALL_LIB=" (assoc-ref %outputs "out") "/lib") (string-append "INSTALL_INCLUDE=" - (assoc-ref %outputs "out") "/include")) + (assoc-ref %outputs "out") "/include") + "library") #:phases - (alist-cons-before - 'install 'prepare-out - ;; README.txt states that the target directories must exist prior to - ;; running "make install". - (lambda _ - (mkdir-p (string-append (assoc-ref %outputs "out") "/lib")) - (mkdir-p (string-append (assoc-ref %outputs "out") "/include"))) - ;; no configure script - (alist-delete 'configure %standard-phases)))) + (modify-phases %standard-phases + (delete 'configure)))) ;no configure script (inputs `(("tbb" ,tbb) - ("lapack" ,lapack))) + ("lapack" ,lapack) + ("metis" ,metis))) (home-page "http://faculty.cse.tamu.edu/davis/suitesparse.html") (synopsis "Suite of sparse matrix software") (description @@ -2686,7 +2693,7 @@ revised simplex and the branch-and-bound methods.") (define-public dealii (package (name "dealii") - (version "8.4.1") + (version "8.5.0") (source (origin (method url-fetch) @@ -2694,7 +2701,7 @@ revised simplex and the branch-and-bound methods.") "download/v" version "/dealii-" version ".tar.gz")) (sha256 (base32 - "1bdksvvyp1rj37df1ndh8j3x9nzpc3sazw8nd0hzvnlw0qnyk800")) + "0yfpy4zh8j7hmqakw17zdlmvfdcmhwgs66wcb716plc4y7v3z4g6")) (modules '((guix build utils))) (snippet ;; Remove bundled sources: UMFPACK, TBB, muParser, and boost @@ -2713,21 +2720,10 @@ revised simplex and the branch-and-bound methods.") ("suitesparse" ,suitesparse))) ;for UMFPACK (arguments `(#:build-type "DebugRelease" ;only supports Release, Debug, or DebugRelease - #:configure-flags '("-DCOMPAT_FILES=OFF") ;Follow new directory structure - #:phases (modify-phases %standard-phases - (add-after - 'install 'hint-example-prefix - ;; Set Cmake hints in examples so that they can find this - ;; deal.II when configuring. - (lambda* (#:key outputs #:allow-other-keys) - (let* ((out (assoc-ref %outputs "out")) - (exmpl (string-append out "/share/doc" - "/dealii/examples"))) - (substitute* (find-files exmpl "CMakeLists.txt") - (("([[:space:]]*HINTS.*)\n" _ line) - (string-append line " $ENV{HOME}/.guix-profile " - out "\n"))) - #t)))))) + #:configure-flags + ;; Work around a bug in libsuitesparseconfig linking + ;; see https://github.com/dealii/dealii/issues/4745 + '("-DCMAKE_POSITION_INDEPENDENT_CODE:BOOL=ON"))) (home-page "https://www.dealii.org") (synopsis "Finite element library") (description diff --git a/gnu/packages/moreutils.scm b/gnu/packages/moreutils.scm index b343a8db6d..03ffa8f992 100644 --- a/gnu/packages/moreutils.scm +++ b/gnu/packages/moreutils.scm @@ -1,7 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com> ;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il> -;;; Copyright © 2016 Tobias Geerinckx-Rice <me@tobias.gr> +;;; Copyright © 2016, 2017 Tobias Geerinckx-Rice <me@tobias.gr> ;;; ;;; This file is part of GNU Guix. ;;; @@ -30,21 +30,20 @@ (define-public moreutils (package (name "moreutils") - (version "0.60") + (version "0.61") (source (origin (method url-fetch) (uri (list (string-append - "mirror://debian/pool/main/m/moreutils/moreutils_" - version ".orig.tar.xz") - ;; The main Debian mirrors only hold the current packages. + "https://git.joeyh.name/index.cgi/moreutils.git/snapshot/" + name "-" version ".tar.gz") (string-append - "http://snapshot.debian.org/archive/debian-debug/20170109T210531Z" - "/pool/main/m/moreutils/moreutils_0.60.orig.tar.xz"))) + "http://drabczyk.org/" + name "-" version ".tar.gz"))) (sha256 (base32 - "1i8pphg5i5y4x1s1hz73gqhispgspr13bysmk9vh7l6jrfx1hbg4")))) + "12rhzy8hw8vljlf10b7ys9zky0p94fdvd6ihq8w8cnkia4rd6izb")))) (build-system gnu-build-system) ;; For building the manual pages. (native-inputs diff --git a/gnu/packages/patches/ruby-puma-ignore-broken-test.patch b/gnu/packages/patches/ruby-puma-ignore-broken-test.patch deleted file mode 100644 index 8961ffa4ca..0000000000 --- a/gnu/packages/patches/ruby-puma-ignore-broken-test.patch +++ /dev/null @@ -1,13 +0,0 @@ -diff --git a/test/test_cli.rb b/test/test_cli.rb -index 9c515c6..6bd439f 100644 ---- a/test/test_cli.rb -+++ b/test/test_cli.rb -@@ -88,7 +88,7 @@ class TestCLI < Test::Unit::TestCase - s << "GET /stats HTTP/1.0\r\n\r\n" - body = s.read - -- assert_match(/\{ "workers": 2, "phase": 0, "booted_workers": 0, "old_workers": 0, "worker_status": \[\{ "pid": \d+, "index": 0, "phase": 0, "booted": false, "last_checkin": "[^"]+", "last_status": \{\} \},\{ "pid": \d+, "index": 1, "phase": 0, "booted": false, "last_checkin": "[^"]+", "last_status": \{\} \}\] \}/, body.split("\r\n").last) -+ #assert_match(/\{ "workers": 2, "phase": 0, "booted_workers": 0, "old_workers": 0, "worker_status": \[\{ "pid": \d+, "index": 0, "phase": 0, "booted": false, "last_checkin": "[^"]+", "last_status": \{\} \},\{ "pid": \d+, "index": 1, "phase": 0, "booted": false, "last_checkin": "[^"]+", "last_status": \{\} \}\] \}/, body.split("\r\n").last) - - # wait until the first status ping has come through - sleep 6 diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index bc00c021a1..90a7dc661b 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -7982,14 +7982,14 @@ Debian-related files, such as: (define-public python-nbformat (package (name "python-nbformat") - (version "4.1.0") + (version "4.3.0") (source (origin (method url-fetch) (uri (pypi-uri "nbformat" version)) (sha256 (base32 - "0mq8iki3d4mnx7wy05phss7x98mds4fqydin8lcagidp1knw1xnv")))) + "12s7j4qja8b5bs1kyw5dzmrqbjxxj8wk52cyasbiqbv7fblcrssz")))) (build-system python-build-system) (arguments `(#:tests? #f)) ; no test target (propagated-inputs diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm index 414b38c4fe..02cc6e6fde 100644 --- a/gnu/packages/ruby.scm +++ b/gnu/packages/ruby.scm @@ -49,6 +49,7 @@ (define-public ruby (package (name "ruby") + (replacement ruby-2.4.1) (version "2.4.0") (source (origin @@ -102,6 +103,26 @@ a focus on simplicity and productivity.") (home-page "https://ruby-lang.org") (license license:ruby))) +(define-public ruby-2.4.1 + (package + (inherit ruby) + (name "ruby") + (version "2.4.1") + (source + (origin + (method url-fetch) + (uri (string-append "http://cache.ruby-lang.org/pub/ruby/" + (version-major+minor version) + "/ruby-" version ".tar.xz")) + (sha256 + (base32 + "0m763zf2v0jhrha3cx21g4dif6vc9gm714invs8h3sg35ncskj2g")) + (modules '((guix build utils))) + (snippet `(begin + ;; Remove bundled libffi + (delete-file-recursively "ext/fiddle/libffi-3.2.1") + #t)))))) + (define-public ruby-2.3 (package (inherit ruby) @@ -2544,14 +2565,14 @@ you about the changes.") (define-public ruby-activesupport (package (name "ruby-activesupport") - (version "5.0.0") + (version "5.1.3") (source (origin (method url-fetch) (uri (rubygems-uri "activesupport" version)) (sha256 (base32 - "0k7zhnz0aw1ym8phs10r85f91ja45vsd058fm9v0h2k0igw12cpf")))) + "16r18n6b1nlky0xx2lw8c1f15gr2vm34xz5g4byjcxf88m1s07xh")))) (build-system ruby-build-system) (arguments `(#:phases @@ -2857,51 +2878,61 @@ including comments and whitespace.") (license license:expat))) (define-public ruby-tdiff - (package - (name "ruby-tdiff") - (version "0.3.3") - (source (origin - (method url-fetch) - (uri (rubygems-uri "tdiff" version)) - (sha256 - (base32 - "0k41jbvn8qq4mgrixnhlk742b971d136i8wpbcv2cczvi22xpc86")))) - (build-system ruby-build-system) - (native-inputs - `(("ruby-rspec-2" ,ruby-rspec-2) - ("ruby-yard" ,ruby-yard) - ("ruby-rubygems-tasks" ,ruby-rubygems-tasks))) - (synopsis "Calculate the differences between two tree-like structures") - (description - "This library provides functions to calculate the differences between two + ;; Use a newer than released snapshot so that rspec-2 is not required. + (let ((commit "b662a6048f08abc45c1a834e5f34dd1c662935e2")) + (package + (name "ruby-tdiff") + (version (string-append "0.3.3-1." (string-take commit 8))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/postmodern/tdiff.git") + (commit commit))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 + "0n3gq8rx49f7ln6zqlshqfg2mgqyy30rsdjlnki5mv307ykc7ad4")))) + (build-system ruby-build-system) + (native-inputs + `(("ruby-rspec" ,ruby-rspec) + ("ruby-yard" ,ruby-yard) + ("ruby-rubygems-tasks" ,ruby-rubygems-tasks))) + (synopsis "Calculate the differences between two tree-like structures") + (description + "This library provides functions to calculate the differences between two tree-like structures. It is similar to Ruby's built-in @code{TSort} module.") - (home-page "https://github.com/postmodern/tdiff") - (license license:expat))) + (home-page "https://github.com/postmodern/tdiff") + (license license:expat)))) (define-public ruby-nokogiri-diff - (package - (name "ruby-nokogiri-diff") - (version "0.2.0") - (source (origin - (method url-fetch) - (uri (rubygems-uri "nokogiri-diff" version)) - (sha256 - (base32 - "0njr1s42war0bj1axb2psjvk49l74a8wzr799wckqqdcb6n51lc1")))) - (build-system ruby-build-system) - (propagated-inputs - `(("ruby-tdiff" ,ruby-tdiff) - ("ruby-nokogiri" ,ruby-nokogiri))) - (native-inputs - `(("ruby-rspec-2" ,ruby-rspec-2) - ("ruby-yard" ,ruby-yard) - ("ruby-rubygems-tasks" ,ruby-rubygems-tasks))) - (synopsis "Calculate the differences between two XML/HTML documents") - (description - "@code{Nokogiri::Diff} adds the ability to calculate the + ;; Use a newer than released snapshot so that rspec-2 is not required. + (let ((commit "a38491e4d8709b7406f2cae11a50226d927d06f5")) + (package + (name "ruby-nokogiri-diff") + (version (string-append "0.2.0-1." (string-take commit 8))) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/postmodern/nokogiri-diff.git") + (commit commit))) + (file-name (string-append name "-" version "-checkout")) + (sha256 + (base32 + "1ah2sfjh9n1p0ln2wkqzfl448ml7j4zfy6dhp1qgzq2m41php6rf")))) + (build-system ruby-build-system) + (propagated-inputs + `(("ruby-tdiff" ,ruby-tdiff) + ("ruby-nokogiri" ,ruby-nokogiri))) + (native-inputs + `(("ruby-rspec" ,ruby-rspec) + ("ruby-yard" ,ruby-yard) + ("ruby-rubygems-tasks" ,ruby-rubygems-tasks))) + (synopsis "Calculate the differences between two XML/HTML documents") + (description + "@code{Nokogiri::Diff} adds the ability to calculate the differences (added or removed nodes) between two XML/HTML documents.") - (home-page "https://github.com/postmodern/nokogiri-diff") - (license license:expat))) + (home-page "https://github.com/postmodern/nokogiri-diff") + (license license:expat)))) (define-public ruby-rack (package @@ -3998,7 +4029,7 @@ part of the Prawn PDF generator.") (define-public ruby-puma (package (name "ruby-puma") - (version "3.6.0") + (version "3.9.1") (source (origin (method url-fetch) @@ -4008,32 +4039,17 @@ part of the Prawn PDF generator.") (file-name (string-append name "-" version ".tar.gz")) (sha256 (base32 - "08aws79n9slcr50d9lwm011cp1pxvr1409c2jmyjxywvrc0a30v1")) - ;; Ignore broken tests reported upstream. - ;; https://github.com/puma/puma/issues/995 - ;; https://github.com/puma/puma/issues/1044 - (patches (search-patches "ruby-puma-ignore-broken-test.patch")))) + "03pifga841h17brh4vgia8i2ybh3cmsyg0dbybzdf6dq51wzcxdx")))) (build-system ruby-build-system) (arguments - `(#:phases + `(#:tests? #f ; Tests require an out-dated version of minitest. + #:phases (modify-phases %standard-phases - (add-after 'unpack 'delete-integration-tests - (lambda _ - ;; One broken test in this file cannot be easily removed in - ;; isolation, it probably causes race conditions. So we delete - ;; the entire file. - (delete-file "test/test_integration.rb") - #t)) (add-before 'build 'fix-gemspec (lambda _ (substitute* "puma.gemspec" (("git ls-files") "find * |sort")) #t))))) - (native-inputs - `(("ruby-hoe" ,ruby-hoe) - ("ruby-rake-compiler" ,ruby-rake-compiler) - ("ruby-hoe-git" ,ruby-hoe-git) - ("ruby-rack" ,ruby-rack))) (synopsis "Simple, concurrent HTTP server for Ruby/Rack") (description "Puma is a simple, fast, threaded, and highly concurrent HTTP 1.1 server diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 55a8a2a483..bdee8e59c7 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -1031,14 +1031,14 @@ aesthetic attributes.") (define-public r-gdtools (package (name "r-gdtools") - (version "0.1.4") + (version "0.1.5") (source (origin (method url-fetch) (uri (cran-uri "gdtools" version)) (sha256 (base32 - "0l8c4bh6765x9s6rw3mfm1bgicdzdngir1kxh9pxx4sidrdndcip")))) + "09y9x09gri33ghhrvjjnj5k5rk0kdpsk3wq02cln8gmywd6728vk")))) (build-system r-build-system) (native-inputs `(("r-rcpp" ,r-rcpp) @@ -3280,37 +3280,6 @@ optimized in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines.") (license license:gpl2+))) -(define-public r-igraph - (package - (name "r-igraph") - (version "1.1.2") - (source - (origin - (method url-fetch) - (uri (cran-uri "igraph" version)) - (sha256 - (base32 - "1v26wyk52snh8z6m5p7yqwcd9dbqifhm57j112i9x53ppi0npcc9")))) - (build-system r-build-system) - (native-inputs - `(("gfortran" ,gfortran))) - (inputs - `(("gmp" ,gmp) - ("libxml2" ,libxml2))) - (propagated-inputs - `(("r-irlba" ,r-irlba) - ("r-magrittr" ,r-magrittr) - ("r-matrix" ,r-matrix) - ("r-pkgconfig" ,r-pkgconfig))) - (home-page "http://igraph.org") - (synopsis "Network analysis and visualization") - (description - "This package provides routines for simple graphs and network analysis. -It can handle large graphs very well and provides functions for generating -random and regular graphs, graph visualization, centrality methods and much -more.") - (license license:gpl2+))) - (define-public r-r-methodss3 (package (name "r-r-methodss3") @@ -4217,13 +4186,13 @@ representation of R code.") (define-public r-ggbeeswarm (package (name "r-ggbeeswarm") - (version "0.5.3") + (version "0.6.0") (source (origin (method url-fetch) (uri (cran-uri "ggbeeswarm" version)) (sha256 (base32 - "1jgp55rvmzc4agcrlsjn8m5lk85di9c4wj94xzikqkql4lvq3qpd")))) + "0crk29p5vi1r3a988kms4y7r0iqwgwzsikgvh18r9wbzyr98bb5v")))) (build-system r-build-system) (propagated-inputs `(("r-beeswarm" ,r-beeswarm) @@ -4632,6 +4601,111 @@ can be efficiently implemented directly in the R language.") regression methodology including model selections and multivariate statistics.") (license license:gpl2+))) +(define-public r-pcapp + (package + (name "r-pcapp") + (version "1.9-72") + (source + (origin + (method url-fetch) + (uri (cran-uri "pcaPP" version)) + (sha256 + (base32 + "0i2822bv86dpqmk3q17x61nsp3gjjnn4nr8191rwvbiib7xhpgaq")))) + (properties `((upstream-name . "pcaPP"))) + (build-system r-build-system) + (propagated-inputs + `(("r-mvtnorm" ,r-mvtnorm))) + (home-page "http://cran.r-project.org/web/packages/pcaPP") + (synopsis "Robust PCA by projection pursuit") + (description + "This package provides functions for robust @dfn{principal component +analysis} (PCA) by projection pursuit.") + (license license:gpl3+))) + +(define-public r-rrcov + (package + (name "r-rrcov") + (version "1.4-3") + (source + (origin + (method url-fetch) + (uri (cran-uri "rrcov" version)) + (sha256 + (base32 + "0kagqggi634mvrhd67ia7mpjrj5v6w2wq0z3kyppg5xkvzh335nq")))) + (build-system r-build-system) + (propagated-inputs + `(("r-cluster" ,r-cluster) + ("r-lattice" ,r-lattice) + ("r-mvtnorm" ,r-mvtnorm) + ("r-pcapp" ,r-pcapp) + ("r-robustbase" ,r-robustbase))) + (native-inputs + `(("gfortran" ,gfortran))) + (home-page "http://cran.r-project.org/web/packages/rrcov") + (synopsis "Scalable robust estimators with high breakdown Point") + (description + "This package provides an implementation of robust location and scatter +estimation and robust multivariate analysis with high breakdown point.") + (license license:gpl2+))) + +(define-public r-fit-models + (package + (name "r-fit-models") + (version "0.5-14") + (source + (origin + (method url-fetch) + (uri (cran-uri "fit.models" version)) + (sha256 + (base32 + "0vjbzmx0ambm6yzidb4vbgmhclwzwv2iz2cwl54ccdkvx4cx3fck")))) + (properties `((upstream-name . "fit.models"))) + (build-system r-build-system) + (propagated-inputs + `(("r-lattice" ,r-lattice))) + (home-page "http://cran.r-project.org/web/packages/fit.models") + (synopsis "Compare fitted models") + (description + "The @code{fit.models} function and its associated methods (coefficients, print, +summary, plot, etc.) were originally provided in the @code{robust} package to +compare robustly and classically fitted model objects. The aim of the +@code{fit.models} package is to separate this fitted model object comparison +functionality from the robust package and to extend it to support fitting +methods (e.g., classical, robust, Bayesian, regularized, etc.) more +generally.") + ;; Any version of the GPL + (license (list license:gpl2+ license:gpl3+)))) + +(define-public r-robust + (package + (name "r-robust") + (version "0.4-18") + (source + (origin + (method url-fetch) + (uri (cran-uri "robust" version)) + (sha256 + (base32 + "1b7qh1aff500nd6dh4y2ipmjgdiq8991shflb63pc39vpc0ny6g4")))) + (build-system r-build-system) + (propagated-inputs + `(("r-fit-models" ,r-fit-models) + ("r-lattice" ,r-lattice) + ("r-mass" ,r-mass) + ("r-robustbase" ,r-robustbase) + ("r-rrcov" ,r-rrcov))) + (native-inputs + `(("gfortran" ,gfortran))) + (home-page "http://cran.r-project.org/web/packages/robust") + (synopsis "Port of the S+ \"Robust Library\"") + (description + "This package is a port of the S+ \"Robust Library\". It provides +methods for robust statistics, notably for robust regression and robust +multivariate analysis.") + (license license:gpl2))) + (define-public r-trimcluster (package (name "r-trimcluster") diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm index 628396e52c..49998120d2 100644 --- a/gnu/packages/virtualization.scm +++ b/gnu/packages/virtualization.scm @@ -478,7 +478,7 @@ virtualization library.") (define-public virt-manager (package (name "virt-manager") - (version "1.4.1") + (version "1.4.2") (source (origin (method url-fetch) (uri (string-append "https://virt-manager.org/download/sources" @@ -486,7 +486,7 @@ virtualization library.") version ".tar.gz")) (sha256 (base32 - "0i1rkxz730vw1nqghrp189jhhp53pw81k0h71hhxmyqlkyclkig6")))) + "0x6mnqw8bng3r69pvmnq9q6yyhicxg22yz62b6dzbb4z16xl1r23")))) (build-system python-build-system) (arguments `(#:python ,python-2 diff --git a/gnu/services/herd.scm b/gnu/services/herd.scm index f8d60a4802..e16d51b9d0 100644 --- a/gnu/services/herd.scm +++ b/gnu/services/herd.scm @@ -49,7 +49,8 @@ unload-services unload-service load-services - start-service)) + start-service + stop-service)) ;;; Commentary: ;;; @@ -146,7 +147,7 @@ result. Otherwise return #f." (force-output sock) (match (read sock) - (('reply ('version 0 _ ...) ('result (result)) ('error #f) + (('reply ('version 0 _ ...) ('result result) ('error #f) ('messages messages)) (for-each display-message messages) (cont result)) @@ -222,6 +223,10 @@ returns a shepherd <service> object." (with-shepherd-action name ('start) result result)) +(define (stop-service name) + (with-shepherd-action name ('stop) result + result)) + ;; Local Variables: ;; eval: (put 'alist-let* 'scheme-indent-function 2) ;; eval: (put 'with-shepherd 'scheme-indent-function 1) diff --git a/guix/download.scm b/guix/download.scm index d7590d4110..bf818e3cdf 100644 --- a/guix/download.scm +++ b/guix/download.scm @@ -67,12 +67,13 @@ ,@(map (cut string-append <> "/gcc") gnu-mirrors)) (gnupg "http://gd.tuwien.ac.at/privacy/gnupg/" + "http://artfiles.org/gnupg.org" + "http://www.crysys.hu/" + "https://gnupg.org/ftp/gcrypt/" "ftp://mirrors.dotsrc.org/gcrypt/" "ftp://mirror.cict.fr/gnupg/" - "http://artfiles.org/gnupg.org" "ftp://ftp.franken.de/pub/crypt/mirror/ftp.gnupg.org/gcrypt/" "ftp://ftp.freenet.de/pub/ftp.gnupg.org/gcrypt/" - "http://www.crysys.hu/" "ftp://ftp.hi.is/pub/mirrors/gnupg/" "ftp://ftp.heanet.ie/mirrors/ftp.gnupg.org/gcrypt/" "ftp://ftp.bit.nl/mirror/gnupg/" |