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authorMark H Weaver <mhw@netris.org>2018-05-29 21:20:47 -0400
committerMark H Weaver <mhw@netris.org>2018-05-29 21:20:47 -0400
commitc0d7c1244a031c94062762db991b7ba7dc34b583 (patch)
treef50419fa9233fb13e3cfd0706f78bdfc13e16572
parente5bbfc7df0a99faa1bb1cf28114363205c166cef (diff)
parentf274f0774dc5099eb043e0fb73e4ba75802f5cce (diff)
downloadpatches-c0d7c1244a031c94062762db991b7ba7dc34b583.tar
patches-c0d7c1244a031c94062762db991b7ba7dc34b583.tar.gz
Merge branch 'master' into core-updates
-rw-r--r--CODE-OF-CONDUCT111
-rw-r--r--gnu/local.mk1
-rw-r--r--gnu/packages/admin.scm4
-rw-r--r--gnu/packages/algebra.scm5
-rw-r--r--gnu/packages/engineering.scm1
-rw-r--r--gnu/packages/file-systems.scm10
-rw-r--r--gnu/packages/freedesktop.scm4
-rw-r--r--gnu/packages/game-development.scm4
-rw-r--r--gnu/packages/golang.scm150
-rw-r--r--gnu/packages/machine-learning.scm123
-rw-r--r--gnu/packages/mail.scm4
-rw-r--r--gnu/packages/maths.scm4
-rw-r--r--gnu/packages/mpd.scm4
-rw-r--r--gnu/packages/networking.scm4
-rw-r--r--gnu/packages/patches/swig-octave-patches.patch1119
-rw-r--r--gnu/packages/swig.scm5
-rw-r--r--gnu/packages/version-control.scm6
-rw-r--r--gnu/system/vm.scm1
18 files changed, 1457 insertions, 103 deletions
diff --git a/CODE-OF-CONDUCT b/CODE-OF-CONDUCT
index 0458fd787c..ef90330cda 100644
--- a/CODE-OF-CONDUCT
+++ b/CODE-OF-CONDUCT
@@ -1,51 +1,78 @@
-Contributor Code of Conduct
+Contributor Covenant Code of Conduct
Note: In the sequel, "project" refers to GNU Guix, and "project
maintainer(s)" refers to maintainer(s) of GNU Guix.
-As contributors and maintainers of this project, and in the interest of
-fostering an open and welcoming community, we pledge to respect all
-people who contribute through reporting issues, posting feature
-requests, updating documentation, submitting pull requests or patches,
-and other activities.
+Our Pledge
+
+In the interest of fostering an open and welcoming environment, we as
+contributors and maintainers pledge to making participation in our project and
+our community a harassment-free experience for everyone, regardless of age, body
+size, disability, ethnicity, gender identity and expression, level of experience,
+education, socio-economic status, nationality, personal appearance, race,
+religion, or sexual identity and orientation.
+
+Our Standards
+
+Examples of behavior that contributes to creating a positive environment
+include:
+
+
+* Using welcoming and inclusive language
+* Being respectful of differing viewpoints and experiences
+* Gracefully accepting constructive criticism
+* Focusing on what is best for the community
+* Showing empathy towards other community members
-We are committed to making participation in this project a
-harassment-free experience for everyone, regardless of level of
-experience, gender, gender identity and expression, sexual orientation,
-disability, personal appearance, body size, race, ethnicity, age,
-religion, or nationality.
Examples of unacceptable behavior by participants include:
-* The use of sexualized language or imagery
-* Personal attacks
-* Trolling or insulting/derogatory comments
+
+* The use of sexualized language or imagery and unwelcome sexual attention or
+advances
+* Trolling, insulting/derogatory comments, and personal or political attacks
* Public or private harassment
-* Publishing other's private information, such as physical or electronic
-addresses, without explicit permission
-* Other unethical or unprofessional conduct
-
-Project maintainers have the right and responsibility to remove, edit,
-or reject comments, commits, code, wiki edits, issues, and other
-contributions that are not aligned to this Code of Conduct, or to ban
-temporarily or permanently any contributor for other behaviors that they
-deem inappropriate, threatening, offensive, or harmful.
-
-By adopting this Code of Conduct, project maintainers commit themselves
-to fairly and consistently applying these principles to every aspect of
-managing this project. Project maintainers who do not follow or enforce
-the Code of Conduct may be permanently removed from the project team.
-
-This Code of Conduct applies both within project spaces and in public
-spaces when an individual is representing the project or its community.
-
-Instances of abusive, harassing, or otherwise unacceptable behavior may
-be reported by contacting a project maintainer at guix-maintainers@gnu.org.
-All complaints will be reviewed and investigated and will
-result in a response that is deemed necessary and appropriate to the
-circumstances. Maintainers are obligated to maintain confidentiality
-with regard to the reporter of an incident.
-
-This Code of Conduct is adapted from the Contributor Covenant
-(http://contributor-covenant.org), version 1.3.0, available at
-http://contributor-covenant.org/version/1/3/0/
+* Publishing others’ private information, such as a physical or electronic
+address, without explicit permission
+* Other conduct which could reasonably be considered inappropriate in a
+professional setting
+
+
+Our Responsibilities
+
+Project maintainers are responsible for clarifying the standards of acceptable
+behavior and are expected to take appropriate and fair corrective action in
+response to any instances of unacceptable behavior.
+
+Project maintainers have the right and responsibility to remove, edit, or
+reject comments, commits, code, wiki edits, issues, and other contributions
+that are not aligned to this Code of Conduct, or to ban temporarily or
+permanently any contributor for other behaviors that they deem inappropriate,
+threatening, offensive, or harmful.
+
+Scope
+
+This Code of Conduct applies both within project spaces and in public spaces
+when an individual is representing the project or its community. Examples of
+representing a project or community include using an official project e-mail
+address, posting via an official social media account, or acting as an appointed
+representative at an online or offline event. Representation of a project may be
+further defined and clarified by project maintainers.
+
+Enforcement
+
+Instances of abusive, harassing, or otherwise unacceptable behavior may be
+reported by contacting the project team at guix-maintainers@gnu.org. All
+complaints will be reviewed and investigated and will result in a response that
+is deemed necessary and appropriate to the circumstances. The project team is
+obligated to maintain confidentiality with regard to the reporter of an incident.
+Further details of specific enforcement policies may be posted separately.
+
+Project maintainers who do not follow or enforce the Code of Conduct in good
+faith may face temporary or permanent repercussions as determined by other
+members of the project’s leadership.
+
+Attribution
+
+This Code of Conduct is adapted from the Contributor Covenant, version 1.4,
+available at https://www.contributor-covenant.org/version/1/4/code-of-conduct.html
diff --git a/gnu/local.mk b/gnu/local.mk
index 2e266af44d..1f7987b580 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -1105,6 +1105,7 @@ dist_patch_DATA = \
%D%/packages/patches/steghide-fixes.patch \
%D%/packages/patches/strace-kernel-4.16.patch \
%D%/packages/patches/superlu-dist-scotchmetis.patch \
+ %D%/packages/patches/swig-octave-patches.patch \
%D%/packages/patches/swish-e-search.patch \
%D%/packages/patches/swish-e-format-security.patch \
%D%/packages/patches/synfigstudio-fix-ui-with-gtk3.patch \
diff --git a/gnu/packages/admin.scm b/gnu/packages/admin.scm
index 437a183f7b..2583cc2018 100644
--- a/gnu/packages/admin.scm
+++ b/gnu/packages/admin.scm
@@ -1953,7 +1953,7 @@ throughput (in the same interval).")
(define-public thefuck
(package
(name "thefuck")
- (version "3.26")
+ (version "3.27")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/nvbn/thefuck/archive/"
@@ -1961,7 +1961,7 @@ throughput (in the same interval).")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "0ddlf25ik97z34bcpc52xyfhlfm6a3hdi43l6cz4ggwcawdwvn1p"))
+ "0my32n2x8x0f0wr8ql7qgk9qhb6ibv5b1rqs5b2r4nadv0gpiv96"))
(patches (search-patches "thefuck-test-environ.patch"))))
(build-system python-build-system)
(arguments
diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm
index 806dc45a24..816f013655 100644
--- a/gnu/packages/algebra.scm
+++ b/gnu/packages/algebra.scm
@@ -714,9 +714,10 @@ Sine Transform} (DST) and @dfn{Discrete Hartley Transform} (DHT).")
;; but maintainers say it's a known issue and it's unsupported
;; anyway, so just skip them.
'(begin
+ (substitute* "unsupported/CMakeLists.txt"
+ (("add_subdirectory\\(test.*")
+ "# Do not build the tests for unsupported features.\n"))
(substitute* "CMakeLists.txt"
- (("add_subdirectory\\(unsupported\\)")
- "# Do not build the tests for unsupported features.\n")
;; Work around
;; <http://eigen.tuxfamily.org/bz/show_bug.cgi?id=1114>.
(("\"include/eigen3\"")
diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm
index 0f137dd035..a28a5db0eb 100644
--- a/gnu/packages/engineering.scm
+++ b/gnu/packages/engineering.scm
@@ -7,6 +7,7 @@
;;; Copyright © 2016, 2017 Theodoros Foradis <theodoros@foradis.org>
;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018 Clément Lassieur <clement@lassieur.org>
;;;
;;; This file is part of GNU Guix.
;;;
diff --git a/gnu/packages/file-systems.scm b/gnu/packages/file-systems.scm
index 6522662c4e..4fd33ae901 100644
--- a/gnu/packages/file-systems.scm
+++ b/gnu/packages/file-systems.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2017 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Gábor Boskovits <boskovits@gmail.com>
;;; Copyright © 2017 Ricardo Wurmus <rekado@elephly.net>
;;;
@@ -107,17 +107,17 @@ single file can be mounted.")
(define-public disorderfs
(package
(name "disorderfs")
- (version "0.5.2")
+ (version "0.5.3")
(source
(origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/ReproducibleBuilds/disorderfs.git")
- (commit "0.5.2")))
+ (url "https://salsa.debian.org/reproducible-builds/disorderfs.git")
+ (commit version)))
(file-name (git-file-name name version))
(sha256
(base32
- "1j028dq3d4m64mn9xmfamcnnc7i2drmra4pdmxdmqdsi8p7yj4sv"))))
+ "1nmhfvxpvz3xsfxl9wqnh6r2l5m7hjq6n0vpblsl5xdcvwaqcf50"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/freedesktop.scm b/gnu/packages/freedesktop.scm
index 71b35894d9..a6b79f41b0 100644
--- a/gnu/packages/freedesktop.scm
+++ b/gnu/packages/freedesktop.scm
@@ -82,7 +82,7 @@
(define-public xdg-utils
(package
(name "xdg-utils")
- (version "1.1.2")
+ (version "1.1.3")
(source
(origin
(method url-fetch)
@@ -91,7 +91,7 @@
version ".tar.gz"))
(sha256
(base32
- "1k4b4m3aiyqn9k12a0ihcdahzlspl3zhskmm1d7228dvqvi546cm"))))
+ "1nai806smz3zcb2l5iny4x7li0fak0rzmjg6vlyhdqm8z25b166p"))))
(build-system gnu-build-system)
(native-inputs
`(("docbook-xsl" ,docbook-xsl)
diff --git a/gnu/packages/game-development.scm b/gnu/packages/game-development.scm
index be7b758f91..3d6a038d9d 100644
--- a/gnu/packages/game-development.scm
+++ b/gnu/packages/game-development.scm
@@ -396,7 +396,7 @@ support.")
(define-public tiled
(package
(name "tiled")
- (version "1.1.4")
+ (version "1.1.5")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/bjorn/tiled/archive/v"
@@ -404,7 +404,7 @@ support.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32
- "0xb3zwcdk7khdrza6spl02g5n2xbij6nbszv8vi27vagjnmz1wxh"))))
+ "1zrq1nhb50mwqzw3fln6vj49ljddil1v7yby3ahjbcm94s25ll1y"))))
(build-system gnu-build-system)
(inputs
`(("qtbase" ,qtbase)
diff --git a/gnu/packages/golang.scm b/gnu/packages/golang.scm
index 7b09f56853..d61747a09c 100644
--- a/gnu/packages/golang.scm
+++ b/gnu/packages/golang.scm
@@ -1471,3 +1471,153 @@ Features include:
(description "This package is atomic boolean library for Go code,
optimized for performance yet simple to use.")
(license license:expat))))
+
+(define-public go-github-com-urfave-cli
+ (let ((commit "cfb38830724cc34fedffe9a2a29fb54fa9169cd1")
+ (revision "0"))
+ (package
+ (name "go-github-com-urfave-cli")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/urfave/cli.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0y6f4sbzkiiwrxbl15biivj8c7qwxnvm3zl2dd3mw4wzg4x10ygj"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:import-path "github.com/urfave/cli"))
+ (home-page "https://github.com/urfave/cli")
+ (synopsis "Library for building command-line interfaces in Go")
+ (description "This package provides a library for building command-line
+interfaces in Go.")
+ (license license:expat))))
+
+(define-public go-github-com-blang-semver
+ (let ((commit "60ec3488bfea7cca02b021d106d9911120d25fe9")
+ (revision "0"))
+ (package
+ (name "go-github-com-blang-semver")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/blang/semver.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "19pli07y5592g4dyjyj0jq5rn548vc3fz0qg3624vm1j5828p1c2"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:import-path "github.com/blang/semver"))
+ (home-page "https://github.com/blang/semver")
+ (synopsis "Semantic versioning library written in Go")
+ (description "Semver is a library for Semantic versioning written in Go.")
+ (license license:expat))))
+
+(define-public go-github-com-emicklei-go-restful
+ (let ((commit "89ef8af493ab468a45a42bb0d89a06fccdd2fb22")
+ (revision "0"))
+ (package
+ (name "go-github-com-emicklei-go-restful")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/emicklei/go-restful.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0rrlfcfq80fkxifpih6bq31vavb5mf4530xz51pp9pq1mn2fzjfh"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:import-path "github.com/emicklei/go-restful"))
+ (home-page "https://github.com/emicklei/go-restful")
+ (synopsis "Build REST-style web services using Go")
+ (description "This package provides @code{go-restful}, which helps
+developers to use @code{http} methods explicitly and in a way that's consistent
+with the HTTP protocol definition.")
+ (license license:expat))))
+
+(define-public go-github-com-google-cadvisor
+ (let ((commit "2ed7198f77395ee9a172878a0a7ab92ab59a2cfd")
+ (revision "0"))
+ (package
+ (name "go-github-com-google-cadvisor")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/google/cadvisor.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1w8p345z5j0gk3yiq5ah0znd5lfh348p2s624k5r10drz04p3f55"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:import-path "github.com/google/cadvisor"))
+ (home-page "https://github.com/google/cadvisor")
+ (synopsis "Analyze resource usage of running containers")
+ (description "The package provides @code{cadvisor}, which provides
+information about the resource usage and preformance characteristics of running
+containers.")
+ (license license:asl2.0))))
+
+(define-public go-github-com-google-gofuzz
+ (let ((commit "fd52762d25a41827db7ef64c43756fd4b9f7e382")
+ (revision "0"))
+ (package
+ (name "go-github-com-google-gofuzz")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/google/gofuzz.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1yxmmr73h0lq7ryf3q9a7pcm2x5xrg4d5bxkq8n5pxwxwyq26kw8"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:import-path "github.com/google/gofuzz"))
+ (home-page "https://github.com/google/gofuzz")
+ (synopsis "Fuzz testing library for Go")
+ (description "Gofuzz is a library for populationg Go objects with random
+values for the purpose of fuzz testing.")
+ (license license:asl2.0))))
+
+(define-public go-github-com-gorilla-context
+ (let ((commit "08b5f424b9271eedf6f9f0ce86cb9396ed337a42")
+ (revision "0"))
+ (package
+ (name "go-github-com-gorilla-context")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/gorilla/context.git")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "03p4hn87vcmfih0p9w663qbx9lpsf7i7j3lc7yl7n84la3yz63m4"))))
+ (build-system go-build-system)
+ (arguments
+ '(#:import-path "github.com/gorilla/context"))
+ (home-page "https://github.com/gorilla/context")
+ (synopsis "Go registry for request variables")
+ (description "This package provides @code{gorilla/context}, which is a general purpose registry for global request variables in the Go programming language.")
+ (license license:bsd-3))))
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index fb511b4949..e6f7a18346 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -4,6 +4,7 @@
;;; Copyright © 2016, 2017 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018 Kei Kebreau <kkebreau@posteo.net>
;;; Copyright © 2018 Mark Meyer <mark@ofosos.org>
;;; Copyright © 2018 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2018 Fis Trivial <ybbs.daans@hotmail.com>
@@ -36,6 +37,7 @@
#:use-module (guix build-system r)
#:use-module (guix git-download)
#:use-module (gnu packages)
+ #:use-module (gnu packages algebra)
#:use-module (gnu packages autotools)
#:use-module (gnu packages boost)
#:use-module (gnu packages check)
@@ -366,7 +368,7 @@ sample proximities between pairs of cases.")
(define-public shogun
(package
(name "shogun")
- (version "4.0.0")
+ (version "6.1.3")
(source
(origin
(method url-fetch)
@@ -376,7 +378,7 @@ sample proximities between pairs of cases.")
"/sources/shogun-" version ".tar.bz2"))
(sha256
(base32
- "159nlijnb7mnrv9za80wnm1shwvy45hgrqzn51hxy7gw4z6d6fdb"))
+ "1rn9skm3nw6hr7mr3lgp2gfqhi7ii0lyxck7qmqnf8avq349s5jp"))
(modules '((guix build utils)
(ice-9 rdelim)))
(snippet
@@ -408,8 +410,20 @@ sample proximities between pairs of cases.")
(and skipping? (not skip-next?)))
(display line out))
(loop (read-line in 'concat) skip-next?)))))))
- (for-each delete-ifdefs (find-files "src/shogun/kernel/"
- "^Kernel\\.(cpp|h)"))
+ (for-each delete-ifdefs
+ (append
+ (find-files "src/shogun/classifier/mkl"
+ "^MKLClassification\\.cpp")
+ (find-files "src/shogun/classifier/svm"
+ "^SVMLightOneClass\\.(cpp|h)")
+ (find-files "src/shogun/multiclass"
+ "^ScatterSVM\\.(cpp|h)")
+ (find-files "src/shogun/kernel/"
+ "^(Kernel|CombinedKernel|ProductKernel)\\.(cpp|h)")
+ (find-files "src/shogun/regression/svr"
+ "^(MKLRegression|SVRLight)\\.(cpp|h)")
+ (find-files "src/shogun/transfer/domain_adaptation"
+ "^DomainAdaptationSVM\\.(cpp|h)")))
#t))))
(build-system cmake-build-system)
(arguments
@@ -423,62 +437,59 @@ sample proximities between pairs of cases.")
"applications/easysvm/data"
"applications/msplicer/data"
"applications/ocr/data"
- "examples/documented/data"
- "examples/documented/matlab_static"
- "examples/documented/octave_static"
- "examples/undocumented/data"
- "examples/undocumented/matlab_static"
- "examples/undocumented/octave_static"
- "tests/integration/data"
- "tests/integration/matlab_static"
- "tests/integration/octave_static"
- "tests/integration/python_modular/tests"))
+ "examples/meta/data"
+ "examples/undocumented/data"))
#t))
(add-after 'unpack 'change-R-target-path
(lambda* (#:key outputs #:allow-other-keys)
- (substitute* '("src/interfaces/r_modular/CMakeLists.txt"
- "src/interfaces/r_static/CMakeLists.txt"
- "examples/undocumented/r_modular/CMakeLists.txt")
+ (substitute* '("src/interfaces/r/CMakeLists.txt"
+ "examples/meta/r/CMakeLists.txt")
(("\\$\\{R_COMPONENT_LIB_PATH\\}")
(string-append (assoc-ref outputs "out")
"/lib/R/library/")))
#t))
(add-after 'unpack 'fix-octave-modules
(lambda* (#:key outputs #:allow-other-keys)
- (substitute* '("src/interfaces/octave_modular/CMakeLists.txt"
- "src/interfaces/octave_static/CMakeLists.txt")
+ (substitute* "src/interfaces/octave/CMakeLists.txt"
(("^include_directories\\(\\$\\{OCTAVE_INCLUDE_DIRS\\}")
- "include_directories(${OCTAVE_INCLUDE_DIRS} ${OCTAVE_INCLUDE_DIRS}/octave"))
-
- ;; change target directory
- (substitute* "src/interfaces/octave_modular/CMakeLists.txt"
+ "include_directories(${OCTAVE_INCLUDE_DIRS} ${OCTAVE_INCLUDE_DIRS}/octave")
+ ;; change target directory
(("\\$\\{OCTAVE_OCT_LOCAL_API_FILE_DIR\\}")
(string-append (assoc-ref outputs "out")
"/share/octave/packages")))
+ (substitute* '("src/interfaces/octave/swig_typemaps.i"
+ "src/interfaces/octave/sg_print_functions.cpp")
+ ;; "octave/config.h" and "octave/oct-obj.h" deprecated in Octave.
+ (("octave/config\\.h") "octave/octave-config.h")
+ (("octave/oct-obj.h") "octave/ovl.h"))
#t))
+ (add-after 'unpack 'move-rxcpp
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((rxcpp-dir "shogun/third-party/rxcpp"))
+ (mkdir-p rxcpp-dir)
+ (install-file (assoc-ref inputs "rxcpp") rxcpp-dir)
+ #t)))
(add-before 'build 'set-HOME
;; $HOME needs to be set at some point during the build phase
(lambda _ (setenv "HOME" "/tmp") #t)))
#:configure-flags
(list "-DCMAKE_BUILD_WITH_INSTALL_RPATH=TRUE"
"-DUSE_SVMLIGHT=OFF" ;disable proprietary SVMLIGHT
- ;;"-DJavaModular=ON" ;requires unpackaged jblas
- ;;"-DRubyModular=ON" ;requires unpackaged ruby-narray
- ;;"-DPerlModular=ON" ;"FindPerlLibs" does not exist
- ;;"-DLuaModular=ON" ;fails because lua doesn't build pkgconfig file
- "-DOctaveModular=ON"
- "-DOctaveStatic=ON"
- "-DPythonModular=ON"
- "-DPythonStatic=ON"
- "-DRModular=ON"
- "-DRStatic=ON"
- "-DCmdLineStatic=ON")))
+ "-DBUILD_META_EXAMPLES=OFF" ;requires unpackaged ctags
+ ;;"-DINTERFACE_JAVA=ON" ;requires unpackaged jblas
+ ;;"-DINTERFACE_RUBY=ON" ;requires unpackaged ruby-narray
+ ;;"-DINTERFACE_PERL=ON" ;"FindPerlLibs" does not exist
+ ;;"-DINTERFACE_LUA=ON" ;fails because lua doesn't build pkgconfig file
+ "-DINTERFACE_OCTAVE=ON"
+ "-DINTERFACE_PYTHON=ON"
+ "-DINTERFACE_R=ON")))
(inputs
`(("python" ,python)
("numpy" ,python-numpy)
("r-minimal" ,r-minimal)
("octave" ,octave)
("swig" ,swig)
+ ("eigen" ,eigen)
("hdf5" ,hdf5)
("atlas" ,atlas)
("arpack" ,arpack-ng)
@@ -488,7 +499,8 @@ sample proximities between pairs of cases.")
("lzo" ,lzo)
("zlib" ,zlib)))
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ `(("pkg-config" ,pkg-config)
+ ("rxcpp" ,rxcpp)))
;; Non-portable SSE instructions are used so building fails on platforms
;; other than x86_64.
(supported-systems '("x86_64-linux"))
@@ -502,6 +514,47 @@ tools. This enables both rapid prototyping of data pipelines and extensibility
in terms of new algorithms.")
(license license:gpl3+)))
+(define-public rxcpp
+ (package
+ (name "rxcpp")
+ (version "4.0.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/ReactiveX/RxCpp/archive/v"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "0y2isr8dy2n1yjr9c5570kpc9lvdlch6jv0jvw000amwn5d3krsh"))
+ (file-name (string-append name "-" version ".tar.gz"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'remove-werror
+ (lambda _
+ (substitute* (find-files ".")
+ (("-Werror") ""))
+ #t))
+ (replace 'check
+ (lambda _
+ (invoke "ctest"))))))
+ (native-inputs
+ `(("catch" ,catch-framework)))
+ (home-page "http://reactivex.io/")
+ (synopsis "Reactive Extensions for C++")
+ (description
+ "The Reactive Extensions for C++ (RxCpp) is a library of algorithms for
+values-distributed-in-time. ReactiveX is a library for composing asynchronous
+and event-based programs by using observable sequences.
+
+It extends the observer pattern to support sequences of data and/or events and
+adds operators that allow you to compose sequences together declaratively while
+abstracting away concerns about things like low-level threading,
+synchronization, thread-safety, concurrent data structures, and non-blocking
+I/O.")
+ (license license:asl2.0)))
+
(define-public r-adaptivesparsity
(package
(name "r-adaptivesparsity")
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index b55d9eb3c5..49663fdf90 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -2497,7 +2497,7 @@ killed threads.")
(define-public pan
(package
(name "pan")
- (version "0.144")
+ (version "0.145")
(source
(origin
(method url-fetch)
@@ -2505,7 +2505,7 @@ killed threads.")
version "/source/" name "-" version ".tar.bz2"))
(sha256
(base32
- "0l07y75z8jxhbmfv28slw81gjncs7i89x7fq44zif7xhq5vy7yli"))))
+ "1b4wamv33hprghcjk903bpvnd233yxyrm18qnh13alc8h1553nk8"))))
(arguments
`(#:configure-flags '("--with-gtk3" "--with-gtkspell" "--with-gnutls"
"--enable-libnotify" "--enable-manual"
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 09d2780ced..fa36431e79 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -1337,7 +1337,7 @@ can solve two kinds of problems:
(define-public octave
(package
(name "octave")
- (version "4.2.2")
+ (version "4.4.0")
(source
(origin
(method url-fetch)
@@ -1345,7 +1345,7 @@ can solve two kinds of problems:
version ".tar.lz"))
(sha256
(base32
- "0pkkz1vazsh7ipffb09q0nc2jgx6q27pkkngygjij6jrpcly5zsp"))))
+ "0nm766737gbkq9wqry54a026k3dg7rb1065kngfpwgjz8b544xbp"))))
(build-system gnu-build-system)
(inputs
`(("lapack" ,lapack)
diff --git a/gnu/packages/mpd.scm b/gnu/packages/mpd.scm
index 6f2ff5d784..3c06fb0e64 100644
--- a/gnu/packages/mpd.scm
+++ b/gnu/packages/mpd.scm
@@ -88,7 +88,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
(define-public mpd
(package
(name "mpd")
- (version "0.20.19")
+ (version "0.20.20")
(source (origin
(method url-fetch)
(uri
@@ -97,7 +97,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
"/mpd-" version ".tar.xz"))
(sha256
(base32
- "1hsng4mnaz1jr2s3fy3q78vf2f6102lwphjdls7qln0pj8dyzk81"))))
+ "111m4z7zaz60xfxvz5xkxs1al4vzb8g2wwp7kmj65pvww335ir59"))))
(build-system gnu-build-system)
(arguments
`(#:phases
diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm
index bddd4bc857..43aaf33dd0 100644
--- a/gnu/packages/networking.scm
+++ b/gnu/packages/networking.scm
@@ -546,7 +546,7 @@ of the same name.")
(define-public wireshark
(package
(name "wireshark")
- (version "2.6.0")
+ (version "2.6.1")
(source
(origin
(method url-fetch)
@@ -554,7 +554,7 @@ of the same name.")
version ".tar.xz"))
(sha256
(base32
- "0zqip4ai18iar7sgialc3jmpng1yxxy4i9bphbaig23ss80py73i"))))
+ "126dvd6myjbxjr69dy9vzzdda2lmjy1wwwc6gcs5djb46jy5nvmb"))))
(build-system gnu-build-system)
(inputs `(("c-ares" ,c-ares)
("glib" ,glib)
diff --git a/gnu/packages/patches/swig-octave-patches.patch b/gnu/packages/patches/swig-octave-patches.patch
new file mode 100644
index 0000000000..9fb64a7b1f
--- /dev/null
+++ b/gnu/packages/patches/swig-octave-patches.patch
@@ -0,0 +1,1119 @@
+This patch represents the recently added support for Octave version 4.4 found
+here:
+
+https://github.com/swig/swig/commit/12c66f9b7d884020e896ce92b9783bc3bac95d2d
+
+diff -urN swig-3.0.12.old/CHANGES.current swig-3.0.12.new/CHANGES.current
+--- swig-3.0.12.old/CHANGES.current 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/CHANGES.current 2018-05-26 08:40:06.501850058 -0400
+@@ -4,6 +4,14 @@
+ Issue # numbers mentioned below can be found on Github. For more details, add
+ the issue number to the end of the URL: https://github.com/swig/swig/issues/
+
++Version 4.0.0 (in progress)
++===========================
++
++2018-05-12: kwwette
++ [Octave] add support for version 4.4
++ - Should not introduce any user-visible incompatibilities
++
++
+ Version 3.0.12 (27 Jan 2017)
+ ============================
+
+diff -urN swig-3.0.12.old/Examples/Makefile.in swig-3.0.12.new/Examples/Makefile.in
+--- swig-3.0.12.old/Examples/Makefile.in 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Examples/Makefile.in 2018-05-26 08:39:16.510124553 -0400
+@@ -463,7 +463,7 @@
+ # -----------------------------------------------------------------
+
+ octave_run:
+- OCTAVE_HISTFILE=/dev/null $(RUNTOOL) $(OCTAVE) $(OCTAVE_SCRIPT) $(RUNPIPE)
++ env OCTAVE_PATH= OCTAVE_HISTFILE=/dev/null $(RUNTOOL) $(OCTAVE) $(OCTAVE_SCRIPT) $(RUNPIPE)
+
+ # -----------------------------------------------------------------
+ # Version display
+diff -urN swig-3.0.12.old/Examples/octave/module_load/runme.m swig-3.0.12.new/Examples/octave/module_load/runme.m
+--- swig-3.0.12.old/Examples/octave/module_load/runme.m 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Examples/octave/module_load/runme.m 2018-05-26 08:39:16.518124669 -0400
+@@ -5,63 +5,73 @@
+
+ # load module
+ clear all;
++assert(exist("swigexample") == 3);
+ swigexample;
++assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+-assert(exist("swigexample","var"));
+ clear all
++assert(exist("swigexample") == 3);
+ swigexample;
++assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+-assert(exist("swigexample","var"));
+ clear all
+
+ # load module in a function globally before base context
+ clear all;
+-function testme
++function testme_1
++ assert(exist("swigexample") == 3);
+ swigexample;
++ assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+- assert(exist("swigexample","var"));
+ endfunction
+-testme
+-testme
++testme_1
++testme_1
++assert(exist("swigexample") == 3);
+ swigexample;
++assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+-assert(exist("swigexample","var"));
+ clear all
+-function testme
++function testme_2
++ assert(exist("swigexample") == 3);
+ swigexample;
++ assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+- assert(exist("swigexample","var"));
+ endfunction
+-testme
+-testme
++testme_2
++testme_2
++assert(exist("swigexample") == 3);
+ swigexample;
++assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+-assert(exist("swigexample","var"));
+ clear all
+
+ # load module in a function globally after base context
+ clear all;
++assert(exist("swigexample") == 3);
+ swigexample;
++assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+-assert(exist("swigexample","var"));
+-function testme
++function testme_3
++ assert(exist("swigexample") == 3);
+ swigexample;
++ assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+- assert(exist("swigexample","var"));
+ endfunction
+-testme
+-testme
++testme_3
++testme_3
+ clear all
++assert(exist("swigexample") == 3);
+ swigexample;
++assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+-assert(exist("swigexample","var"));
+-function testme
++function testme_4
++ assert(exist("swigexample") == 3);
+ swigexample;
++ assert(isglobal("swigexample"));
+ assert(cvar.ivar == ifunc);
+- assert(exist("swigexample","var"));
+ endfunction
+-testme
+-testme
++testme_4
++testme_4
+ clear all
+
+ # octave 3.0.5 randomly crashes on the remaining tests
+@@ -71,13 +81,16 @@
+
+ # load module with no cvar
+ clear all;
++who;
++assert(exist("swigexample2") == 3);
+ swigexample2;
++assert(isglobal("swigexample2"));
+ assert(swigexample2.ivar == ifunc);
+-assert(exist("swigexample2","var"));
+-assert(!isglobal("cvar"))
++assert(!exist("cvar", "var"));
+ clear all
++assert(exist("swigexample2") == 3);
+ swigexample2;
++assert(isglobal("swigexample2"));
+ assert(swigexample2.ivar == ifunc);
+-assert(exist("swigexample2","var"));
+-assert(!isglobal("cvar"))
++assert(!exist("cvar", "var"));
+ clear all
+diff -urN swig-3.0.12.old/Examples/test-suite/octave/Makefile.in swig-3.0.12.new/Examples/test-suite/octave/Makefile.in
+--- swig-3.0.12.old/Examples/test-suite/octave/Makefile.in 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Examples/test-suite/octave/Makefile.in 2018-05-26 08:39:16.511124567 -0400
+@@ -59,7 +59,7 @@
+ # a file is found which has _runme.m appended after the testcase name.
+ run_testcase = \
+ if [ -f $(SCRIPTDIR)/$(SCRIPTPREFIX)$*$(SCRIPTSUFFIX) ]; then \
+- env LD_LIBRARY_PATH=.:$$LD_LIBRARY_PATH OCTAVE_PATH=$(srcdir):$$OCTAVE_PATH $(RUNTOOL) $(OCTAVE) $(SCRIPTDIR)/$(SCRIPTPREFIX)$*$(SCRIPTSUFFIX); \
++ env LD_LIBRARY_PATH=.:$$LD_LIBRARY_PATH OCTAVE_PATH=$(srcdir) OCTAVE_HISTFILE=/dev/null $(RUNTOOL) $(OCTAVE) $(SCRIPTDIR)/$(SCRIPTPREFIX)$*$(SCRIPTSUFFIX); \
+ fi
+
+ # Clean: remove the generated .m file
+diff -urN swig-3.0.12.old/Examples/test-suite/octave/Makefile.in.orig swig-3.0.12.new/Examples/test-suite/octave/Makefile.in.orig
+--- swig-3.0.12.old/Examples/test-suite/octave/Makefile.in.orig 1969-12-31 19:00:00.000000000 -0500
++++ swig-3.0.12.new/Examples/test-suite/octave/Makefile.in.orig 2017-01-27 18:52:02.000000000 -0500
+@@ -0,0 +1,92 @@
++#######################################################################
++# Makefile for octave test-suite
++#######################################################################
++
++LANGUAGE = octave
++OCTAVE = @OCTAVE@
++SCRIPTSUFFIX = _runme.m
++
++srcdir = @srcdir@
++top_srcdir = @top_srcdir@
++top_builddir = @top_builddir@
++
++CPP_TEST_CASES += \
++ li_std_pair_extra \
++ li_std_string_extra \
++ octave_cell_deref\
++ octave_dim
++
++CPP_TEST_BROKEN += \
++ implicittest \
++ li_implicit \
++ li_std_set \
++ li_std_stream
++
++#C_TEST_CASES +=
++
++#
++# This test only works with modern C compilers
++#
++#C_TEST_CASES += \
++# complextest
++
++include $(srcdir)/../common.mk
++
++# Overridden variables here
++LIBS = -L.
++CSRCS = octave_empty.c
++
++# Custom tests - tests with additional commandline options
++# none!
++
++# Rules for the different types of tests
++%.cpptest:
++ $(setup)
++ +$(swig_and_compile_cpp)
++ $(run_testcase)
++
++%.ctest:
++ $(setup)
++ +$(swig_and_compile_c)
++ $(run_testcase)
++
++%.multicpptest:
++ $(setup)
++ +$(swig_and_compile_multi_cpp)
++ $(run_testcase)
++
++# Runs the testcase. A testcase is only run if
++# a file is found which has _runme.m appended after the testcase name.
++run_testcase = \
++ if [ -f $(SCRIPTDIR)/$(SCRIPTPREFIX)$*$(SCRIPTSUFFIX) ]; then \
++ env LD_LIBRARY_PATH=.:$$LD_LIBRARY_PATH OCTAVE_PATH=$(srcdir):$$OCTAVE_PATH $(RUNTOOL) $(OCTAVE) $(SCRIPTDIR)/$(SCRIPTPREFIX)$*$(SCRIPTSUFFIX); \
++ fi
++
++# Clean: remove the generated .m file
++%.clean:
++ @rm -f hugemod.h hugemod_a.i hugemod_b.i hugemod_a.m hugemod_b.m hugemod_runme.m
++ @rm -f $*.m;
++
++clean:
++ $(MAKE) -f $(top_builddir)/$(EXAMPLES)/Makefile SRCDIR='$(SRCDIR)' octave_clean
++
++cvsignore:
++ @echo '*wrap* *.mc *.so *.dll *.exp *.lib'
++ @echo Makefile
++ @for i in ${CPP_TEST_CASES} ${C_TEST_CASES}; do echo $$i.m; done
++ @for i in ${CPP_TEST_CASES} ${C_TEST_CASES}; do if grep -q $${i}_runme.m CVS/Entries ; then echo $${i}_runme.m; fi; done
++ @echo clientdata_prop_a.m
++ @echo clientdata_prop_b.m
++ @echo imports_a.m
++ @echo imports_b.m
++ @echo mod_a.m mod_b.m
++ @echo hugemod.h hugemod_a.i hugemod_b.i hugemod_a.m hugemod_b.m hugemod_runme.m
++ @echo template_typedef_import.m
++
++
++hugemod:
++ perl hugemod.pl
++ $(MAKE) hugemod_a.cpptest
++ $(MAKE) hugemod_b.cpptest
++ time $(OCTAVE) hugemod_runme.m
++ time $(OCTAVE) hugemod_runme.m
+diff -urN swig-3.0.12.old/Examples/test-suite/register_par.i swig-3.0.12.new/Examples/test-suite/register_par.i
+--- swig-3.0.12.old/Examples/test-suite/register_par.i 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Examples/test-suite/register_par.i 2018-05-26 08:40:28.146164544 -0400
+@@ -2,5 +2,5 @@
+
+ // bug # 924413
+ %inline {
+- void clear_tree_flags(register struct tree *tp, register int i) {}
++ void clear_tree_flags(register struct swig_tree *tp, register int i) {}
+ }
+diff -urN swig-3.0.12.old/Examples/test-suite/register_par.i.orig swig-3.0.12.new/Examples/test-suite/register_par.i.orig
+--- swig-3.0.12.old/Examples/test-suite/register_par.i.orig 1969-12-31 19:00:00.000000000 -0500
++++ swig-3.0.12.new/Examples/test-suite/register_par.i.orig 2018-05-26 08:39:16.518124669 -0400
+@@ -0,0 +1,6 @@
++%module register_par
++
++// bug # 924413
++%inline {
++ void clear_tree_flags(register struct tree *tp, register int i) {}
++}
+diff -urN swig-3.0.12.old/Examples/test-suite/register_par.i.rej swig-3.0.12.new/Examples/test-suite/register_par.i.rej
+--- swig-3.0.12.old/Examples/test-suite/register_par.i.rej 1969-12-31 19:00:00.000000000 -0500
++++ swig-3.0.12.new/Examples/test-suite/register_par.i.rej 2018-05-26 08:39:16.518124669 -0400
+@@ -0,0 +1,15 @@
++--- Examples/test-suite/register_par.i
+++++ Examples/test-suite/register_par.i
++@@ -1,10 +1,10 @@
++ %module register_par
++
++ %{
++-struct tree;
+++struct swig_tree;
++ %}
++
++ // bug # 924413
++ %inline {
++- void clear_tree_flags(register struct tree *tp, register int i) {}
+++ void clear_tree_flags(register struct swig_tree *tp, register int i) {}
++ }
+diff -urN swig-3.0.12.old/Lib/octave/octcontainer.swg swig-3.0.12.new/Lib/octave/octcontainer.swg
+--- swig-3.0.12.old/Lib/octave/octcontainer.swg 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Lib/octave/octcontainer.swg 2018-05-26 08:39:16.488124234 -0400
+@@ -567,7 +567,11 @@
+ if (seq) *seq = p;
+ return SWIG_OLDOBJ;
+ }
++%#if SWIG_OCTAVE_PREREQ(4,4,0)
++ } else if (obj.iscell()) {
++%#else
+ } else if (obj.is_cell()) {
++%#endif
+ try {
+ OctSequence_Cont<value_type> octseq(obj);
+ if (seq) {
+diff -urN swig-3.0.12.old/Lib/octave/octprimtypes.swg swig-3.0.12.new/Lib/octave/octprimtypes.swg
+--- swig-3.0.12.old/Lib/octave/octprimtypes.swg 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Lib/octave/octprimtypes.swg 2018-05-26 08:39:16.492124292 -0400
+@@ -18,7 +18,11 @@
+ SWIGINTERN int
+ SWIG_AsVal_dec(bool)(const octave_value& ov, bool *val)
+ {
++%#if SWIG_OCTAVE_PREREQ(4,4,0)
++ if (!ov.islogical())
++%#else
+ if (!ov.is_bool_type())
++%#endif
+ return SWIG_ERROR;
+ if (val)
+ *val = ov.bool_value();
+@@ -214,7 +218,13 @@
+ SWIGINTERN int
+ SWIG_AsCharPtrAndSize(octave_value ov, char** cptr, size_t* psize, int *alloc)
+ {
+- if (ov.is_cell() && ov.rows() == 1 && ov.columns() == 1)
++ if (
++%#if SWIG_OCTAVE_PREREQ(4,4,0)
++ ov.iscell()
++%#else
++ ov.is_cell()
++%#endif
++ && ov.rows() == 1 && ov.columns() == 1)
+ ov = ov.cell_value()(0);
+ if (!ov.is_string())
+ return SWIG_TypeError;
+diff -urN swig-3.0.12.old/Lib/octave/octrun.swg swig-3.0.12.new/Lib/octave/octrun.swg
+--- swig-3.0.12.old/Lib/octave/octrun.swg 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Lib/octave/octrun.swg 2018-05-26 08:39:16.509124538 -0400
+@@ -151,6 +151,67 @@
+ const swig_type_info **base;
+ };
+
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ // in Octave 4.4 behaviour of octave_builtin() appears to have changed and 'self' argument is no longer passed
++ // to function (maybe because this is now a 'method'??) so need to create our own octave_function subclass
++#define SWIG_OCTAVE_BOUND_FUNC(func, args) octave_value(new octave_swig_bound_func(func, args))
++ class octave_swig_bound_func : public octave_function {
++ public:
++
++ octave_swig_bound_func(void) : octave_function(), method(0), first_args()
++ { }
++
++ octave_swig_bound_func(octave_function* _method, octave_value_list _first_args)
++ : octave_function("", ""), method(_method), first_args(_first_args)
++ { }
++
++ octave_swig_bound_func(const octave_swig_bound_func& f) = delete;
++
++ octave_swig_bound_func& operator= (const octave_swig_bound_func& f) = delete;
++
++ ~octave_swig_bound_func(void) = default;
++
++ bool is_function(void) const { return true; }
++
++ octave_function* function_value(bool = false) { return this; }
++
++ octave_value_list call(octave::tree_evaluator& tw, int nargout = 0, const octave_value_list& args = octave_value_list()) {
++ octave_value_list all_args;
++ all_args.append(first_args);
++ all_args.append(args);
++ return method->call(tw, nargout, all_args);
++ }
++
++ octave_value subsref(const std::string &ops, const std::list < octave_value_list > &idx) {
++ octave_value_list ovl = subsref(ops, idx, 1);
++ return ovl.length() ? ovl(0) : octave_value();
++ }
++
++ octave_value_list subsref(const std::string &ops, const std::list < octave_value_list > &idx, int nargout) {
++ assert(ops.size() > 0);
++ assert(ops.size() == idx.size());
++ if (ops != "(")
++ error("invalid function call");
++ octave::tree_evaluator& tw = octave::interpreter::the_interpreter()->get_evaluator();
++ return call(tw, nargout, *idx.begin());
++ }
++
++ protected:
++
++ octave_function* method;
++ octave_value_list first_args;
++
++ std::set<std::string> dispatch_classes;
++
++ private:
++
++ DECLARE_OV_TYPEID_FUNCTIONS_AND_DATA
++ };
++ DEFINE_OV_TYPEID_FUNCTIONS_AND_DATA(octave_swig_bound_func, "octave_swig_bound_func", "octave_swig_bound_func");
++#else
++#define SWIG_OCTAVE_BOUND_FUNC(func, args) octave_value(func)
++#endif
++
+ // octave_swig_type plays the role of both the shadow class and the class
+ // representation within Octave, since there is no support for classes.
+ //
+@@ -323,13 +384,17 @@
+ }
+
+ octave_value_list member_deref(member_value_pair *m, const octave_value_list &args) {
+- if (m->second.is_defined())
+- return m->second;
+- else if (m->first) {
++ if (m->second.is_defined()) {
++ if (m->second.is_function() || m->second.is_function_handle()) {
++ return SWIG_OCTAVE_BOUND_FUNC(m->second.function_value(), args);
++ } else {
++ return m->second;
++ }
++ } else if (m->first) {
+ if (m->first->get_method)
+ return m->first->get_method(args, 1);
+ else if (m->first->method)
+- return octave_value(new octave_builtin(m->first->method));
++ return SWIG_OCTAVE_BOUND_FUNC(new octave_builtin(m->first->method), args);
+ }
+ error("undefined member");
+ return octave_value_list();
+@@ -383,7 +448,11 @@
+ return dim_vector(1,1);
+
+ // Return value should be cell or matrix of integers
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ if (out.iscell()) {
++#else
+ if (out.is_cell()) {
++#endif
+ const Cell & c=out.cell_value();
+ int ndim = c.rows();
+ if (ndim==1 && c.columns()!=1) ndim = c.columns();
+@@ -401,7 +470,11 @@
+ if (error_state) return dim_vector(1,1);
+ }
+ return d;
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ } else if (out.is_matrix_type() || out.isnumeric() ) {
++#else
+ } else if (out.is_matrix_type() || out.is_numeric_type() ) {
++#endif
+ if (out.rows()==1 || out.columns()==1) {
+ Array<int> a = out.int_vector_value();
+ if (error_state) return dim_vector(1,1);
+@@ -476,8 +549,12 @@
+ }
+ types.insert(types.end(), rhs.types.begin(), rhs.types.end());
+ members.insert(rhs.members.begin(), rhs.members.end());
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ assign(rhs.swig_type_name(), rhs.as_value());
++#else
+ rhs.types.clear();
+ rhs.members.clear();
++#endif
+ }
+
+ typedef member_map::const_iterator swig_member_const_iterator;
+@@ -848,7 +925,14 @@
+ octave_function *fcn = is_valid_function(symbol, std::string(), false);
+ if (!fcn)
+ return false;
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::tree_evaluator& tw = octave::interpreter::the_interpreter()->get_evaluator();
++ octave_value_list retval = fcn->call(tw, 1, args);
++ if (retval.length() == 1)
++ ret = retval(0);
++#else
+ ret = fcn->do_multi_index_op(1, args)(0);
++#endif
+ return true;
+ }
+
+@@ -1238,7 +1322,13 @@
+ }
+
+ SWIGRUNTIME octave_swig_type *swig_value_deref(octave_value ov) {
+- if (ov.is_cell() && ov.rows() == 1 && ov.columns() == 1)
++ if (
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ ov.iscell()
++#else
++ ov.is_cell()
++#endif
++ && ov.rows() == 1 && ov.columns() == 1)
+ ov = ov.cell_value()(0);
+ return swig_value_deref(*ov.internal_rep());
+ }
+@@ -1261,12 +1351,24 @@
+ SWIGRUNTIME octave_value swig_binary_op_##name(const octave_base_value&lhs,const octave_base_value &rhs) { \
+ return octave_swig_type::dispatch_binary_op(lhs,rhs,#name); \
+ }
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++#define swigreg_unary_op(name) \
++if (!octave_value_typeinfo::lookup_unary_op(octave_value::op_##name,tid)) \
++typeinfo.register_unary_op(octave_value::op_##name,tid,swig_unary_op_##name);
++#else
+ #define swigreg_unary_op(name) \
+ if (!octave_value_typeinfo::lookup_unary_op(octave_value::op_##name,tid)) \
+ octave_value_typeinfo::register_unary_op(octave_value::op_##name,tid,swig_unary_op_##name);
++#endif
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++#define swigreg_binary_op(name) \
++if (!octave_value_typeinfo::lookup_binary_op(octave_value::op_##name,tid1,tid2)) \
++typeinfo.register_binary_op(octave_value::op_##name,tid1,tid2,swig_binary_op_##name);
++#else
+ #define swigreg_binary_op(name) \
+ if (!octave_value_typeinfo::lookup_binary_op(octave_value::op_##name,tid1,tid2)) \
+ octave_value_typeinfo::register_binary_op(octave_value::op_##name,tid1,tid2,swig_binary_op_##name);
++#endif
+
+ swig_unary_op(not);
+ swig_unary_op(uplus);
+@@ -1300,6 +1402,9 @@
+ swig_binary_op(el_or);
+
+ SWIGRUNTIME void SWIG_InstallUnaryOps(int tid) {
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::type_info& typeinfo = octave::interpreter::the_interpreter()->get_type_info();
++#endif
+ swigreg_unary_op(not);
+ swigreg_unary_op(uplus);
+ swigreg_unary_op(uminus);
+@@ -1309,6 +1414,9 @@
+ swigreg_unary_op(decr);
+ }
+ SWIGRUNTIME void SWIG_InstallBinaryOps(int tid1, int tid2) {
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::type_info& typeinfo = octave::interpreter::the_interpreter()->get_type_info();
++#endif
+ swigreg_binary_op(add);
+ swigreg_binary_op(sub);
+ swigreg_binary_op(mul);
+@@ -1357,7 +1465,13 @@
+ }
+
+ SWIGRUNTIME int SWIG_Octave_ConvertPtrAndOwn(octave_value ov, void **ptr, swig_type_info *type, int flags, int *own) {
+- if (ov.is_cell() && ov.rows() == 1 && ov.columns() == 1)
++ if (
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ ov.iscell()
++#else
++ ov.is_cell()
++#endif
++ && ov.rows() == 1 && ov.columns() == 1)
+ ov = ov.cell_value()(0);
+ if (!ov.is_defined() ||
+ (ov.is_matrix_type() && ov.rows() == 0 && ov.columns() == 0) ) {
+@@ -1390,14 +1504,30 @@
+ }
+
+ SWIGRUNTIMEINLINE octave_value SWIG_Octave_GetGlobalValue(std::string name) {
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::symbol_table& symtab = octave::interpreter::the_interpreter()->get_symbol_table();
++ return symtab.global_varval(name);
++#else
+ return get_global_value(name, true);
++#endif
+ }
+
+ SWIGRUNTIME void SWIG_Octave_SetGlobalValue(std::string name, const octave_value& value) {
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::symbol_table& symtab = octave::interpreter::the_interpreter()->get_symbol_table();
++ symtab.global_assign(name, value);
++#else
+ set_global_value(name, value);
++#endif
+ }
+
+ SWIGRUNTIME void SWIG_Octave_LinkGlobalValue(std::string name) {
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::symbol_table& symtab = octave::interpreter::the_interpreter()->get_symbol_table();
++ octave::symbol_scope symscope = octave::interpreter::the_interpreter()->get_current_scope();
++ symscope.assign(name, symtab.global_varval(name));
++ symscope.mark_global(name);
++#else
+ #if !SWIG_OCTAVE_PREREQ(3,2,0)
+ link_to_global_variable(curr_sym_tab->lookup(name, true));
+ #else
+@@ -1406,6 +1536,7 @@
+ #endif
+ symbol_table::mark_global(name);
+ #endif
++#endif
+ }
+
+ SWIGRUNTIME swig_module_info *SWIG_Octave_GetModule(void *clientdata) {
+diff -urN swig-3.0.12.old/Lib/octave/octruntime.swg swig-3.0.12.new/Lib/octave/octruntime.swg
+--- swig-3.0.12.old/Lib/octave/octruntime.swg 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Lib/octave/octruntime.swg 2018-05-26 08:39:16.507124509 -0400
+@@ -139,7 +139,11 @@
+ #endif
+ #if SWIG_OCTAVE_PREREQ(4,2,0)
+ try {
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::feval(name, octave_value_list(), 0);
++#else
+ feval(name, octave_value_list(), 0);
++#endif
+ retn = true;
+ } catch (octave::execution_exception&) { }
+ #else
+@@ -170,7 +174,7 @@
+ frame.protect_var(discard_error_messages); discard_error_messages = true;
+ frame.protect_var(discard_warning_messages); discard_warning_messages = true;
+ #else
+- unwind_protect::begin_frame("SWIG_Octave_LoadModule");
++ unwind_protect::begin_frame("SWIG_Octave_InstallFunction");
+ unwind_protect_int(error_state); error_state = 0;
+ unwind_protect_int(warning_state); warning_state = 0;
+ unwind_protect_bool(discard_error_messages); discard_error_messages = true;
+@@ -181,7 +185,11 @@
+ args.append(octloadfcn->fcn_file_name());
+ #if SWIG_OCTAVE_PREREQ(4,2,0)
+ try {
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::feval("autoload", args, 0);
++#else
+ feval("autoload", args, 0);
++#endif
+ retn = true;
+ } catch (octave::execution_exception&) { }
+ #else
+@@ -312,6 +320,8 @@
+ Loads the SWIG-generated module `" SWIG_name_d "'.\n\
+ @end deftypefn";
+
++void __swig_atexit__(void) { ::_Exit(0); }
++
+ DEFUN_DLD( SWIG_name, args, nargout, SWIG_name_usage ) {
+
+ static octave_swig_type* module_ns = 0;
+@@ -322,7 +332,9 @@
+ // version 3.4.*, but reappeared in 4.2.*, so turn on for all versions after 3.2.*.
+ // can be turned off with macro definition.
+ #ifndef SWIG_OCTAVE_NO_SEGFAULT_HACK
+-#if SWIG_OCTAVE_PREREQ(3,2,0)
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ atexit(__swig_atexit__);
++#elif SWIG_OCTAVE_PREREQ(3,2,0)
+ octave_exit = ::_Exit;
+ #endif
+ #endif
+@@ -351,15 +363,54 @@
+ "__swig_atexit__; "
+ "atexit(\"__swig_atexit__\", false); "
+ "atexit(\"__swig_atexit__\")");
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::feval("evalin", eval_args, 0);
++#else
+ feval("evalin", eval_args, 0);
+ #endif
++#endif
+
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ {
++ octave::type_info& typeinfo = octave::interpreter::the_interpreter()->get_type_info();
++ string_vector types = typeinfo.installed_type_names();
++ bool register_octave_swig_ref = true;
++ bool register_octave_swig_packed = true;
++ bool register_octave_swig_bound_func = true;
++ for (int i = 0; i < types.numel(); ++i) {
++ if (types(i) == octave_swig_ref::static_type_name()) {
++ register_octave_swig_ref = false;
++ }
++ if (types(i) == octave_swig_packed::static_type_name()) {
++ register_octave_swig_packed = false;
++ }
++ if (types(i) == octave_swig_bound_func::static_type_name()) {
++ register_octave_swig_bound_func = false;
++ }
++ }
++ if (register_octave_swig_ref) {
++ octave_swig_ref::register_type();
++ }
++ if (register_octave_swig_packed) {
++ octave_swig_packed::register_type();
++ }
++ if (register_octave_swig_bound_func) {
++ octave_swig_bound_func::register_type();
++ }
++ }
++#else
+ octave_swig_ref::register_type();
+ octave_swig_packed::register_type();
++#endif
+ SWIG_InitializeModule(0);
+ SWIG_PropagateClientData();
+
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::call_stack& stack = octave::interpreter::the_interpreter()->get_call_stack();
++ octave_function *me = stack.current();
++#else
+ octave_function *me = octave_call_stack::current();
++#endif
+
+ if (!SWIG_Octave_InstallFunction(me, "subclass")) {
+ return octave_value_list();
+@@ -426,10 +477,12 @@
+ }
+ }
+
+-#if !SWIG_OCTAVE_PREREQ(3,2,0)
+- mlock(me->name());
+-#else
++#if SWIG_OCTAVE_PREREQ(4,4,0)
++ octave::interpreter::the_interpreter()->mlock();
++#elif SWIG_OCTAVE_PREREQ(3,2,0)
+ mlock();
++#else
++ mlock(me->name());
+ #endif
+
+ }
+diff -urN swig-3.0.12.old/Lib/octave/std_pair.i swig-3.0.12.new/Lib/octave/std_pair.i
+--- swig-3.0.12.old/Lib/octave/std_pair.i 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/Lib/octave/std_pair.i 2018-05-26 08:39:16.489124248 -0400
+@@ -38,7 +38,13 @@
+ }
+
+ static int asval(const octave_value& obj, std::pair<T,U> *val) {
+- if (obj.is_cell()) {
++ if (
++%#if SWIG_OCTAVE_PREREQ(4,4,0)
++ obj.iscell()
++%#else
++ obj.is_cell()
++%#endif
++ ) {
+ Cell c=obj.cell_value();
+ if (c.numel()<2) {
+ error("pair from Cell array requires at least two elements");
+@@ -96,7 +102,13 @@
+ }
+
+ static int asptr(const octave_value& obj, std::pair<T,U> **val) {
+- if (obj.is_cell()) {
++ if (
++%#if SWIG_OCTAVE_PREREQ(4,4,0)
++ obj.iscell()
++%#else
++ obj.is_cell()
++%#endif
++ ) {
+ Cell c=obj.cell_value();
+ if (c.numel()<2) {
+ error("pair from Cell array requires at least two elements");
+diff -urN swig-3.0.12.old/.travis.yml swig-3.0.12.new/.travis.yml
+--- swig-3.0.12.old/.travis.yml 2017-01-27 18:52:02.000000000 -0500
++++ swig-3.0.12.new/.travis.yml 2018-05-26 08:39:16.520124698 -0400
+@@ -92,6 +92,11 @@
+ dist: trusty
+ - compiler: gcc
+ os: linux
++ env: SWIGLANG=octave SWIGJOBS=-j2 VER=4.4 CPP11=1
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
+ env: SWIGLANG=perl5
+ sudo: required
+ dist: trusty
+diff -urN swig-3.0.12.old/.travis.yml.orig swig-3.0.12.new/.travis.yml.orig
+--- swig-3.0.12.old/.travis.yml.orig 1969-12-31 19:00:00.000000000 -0500
++++ swig-3.0.12.new/.travis.yml.orig 2017-01-27 18:52:02.000000000 -0500
+@@ -0,0 +1,334 @@
++language: cpp
++matrix:
++ include:
++ - compiler: clang
++ os: linux
++ env: SWIGLANG=
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG= SWIG_CC=gcc-5 SWIG_CXX=g++-5 CPP11=1
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG= SWIG_CC=gcc-6 SWIG_CXX=g++-6
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=csharp
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=d
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=go
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=go VER=1.5
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=guile
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=java
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=javascript ENGINE=node
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=javascript ENGINE=jsc
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=javascript ENGINE=v8
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=lua
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=lua VER=5.3
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=octave SWIGJOBS=-j2 # 3.8
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=octave SWIGJOBS=-j2 VER=4.0
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=octave SWIGJOBS=-j2 VER=4.2 CPP11=1
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=perl5
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=php5
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=php VER=7.0
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=php VER=7.1
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python VER=2.4
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python VER=2.5
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python VER=2.6
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python # 2.7
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python PY3=3 VER=3.2
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python PY3=3 VER=3.3
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python PY3=3 VER=3.4
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python PY3=3 VER=3.5
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-builtin VER=2.6
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-builtin
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-builtin PY3=3 VER=3.4
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-builtin PY3=3 VER=3.5
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-builtin PY3=3 VER=3.5 SWIGOPTPY3=
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-O
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-classic
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=r
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=ruby VER=1.9.3
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=ruby VER=2.0.0
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=ruby VER=2.3.0
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=scilab
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=tcl
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG=csharp SWIG_CC=gcc-5 SWIG_CXX=g++-5 CPP11=1
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG=java SWIG_CC=gcc-5 SWIG_CXX=g++-5 CPP11=1
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG=python SWIG_CC=gcc-5 SWIG_CXX=g++-5 CPP11=1
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG=csharp SWIG_CC=gcc-6 SWIG_CXX=g++-6 CPP14=1
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG=java SWIG_CC=gcc-6 SWIG_CXX=g++-6 CPP14=1
++ sudo: required
++ dist: trusty
++ - os: linux
++ env: SWIGLANG=python SWIG_CC=gcc-6 SWIG_CXX=g++-6 CPP14=1
++ sudo: required
++ dist: trusty
++ - compiler: gcc
++ os: osx
++ env: SWIGLANG=
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=csharp
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=go
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=guile
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=java
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=lua
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=perl5
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=php5
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=python
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=python PY3=3
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=ruby
++ - compiler: clang
++ os: osx
++ env: SWIGLANG=tcl
++
++ allow_failures:
++ # Lots of failing tests currently
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=ocaml
++ sudo: required
++ dist: trusty
++ # Not quite working yet
++ - compiler: gcc
++ os: linux
++ env: SWIGLANG=python SWIG_FEATURES=-O
++ sudo: required
++ dist: trusty
++before_install:
++ - date -u
++ - uname -a
++ - if test "$TRAVIS_OS_NAME" = "linux"; then lscpu && cat /proc/cpuinfo | grep "model name" && cat /proc/meminfo | grep MemTotal; fi
++ - if test "$TRAVIS_OS_NAME" = "osx"; then sysctl -a | grep brand_string; fi
++ # Travis overrides CC environment with compiler predefined values
++ - if test -n "$SWIG_CC"; then export CC="$SWIG_CC"; fi
++ - if test -n "$SWIG_CXX"; then export CXX="$SWIG_CXX"; fi
++install:
++ - if test "$TRAVIS_OS_NAME" = "linux"; then source Tools/travis-linux-install.sh; fi
++ - if test "$TRAVIS_OS_NAME" = "osx"; then source Tools/travis-osx-install.sh; fi
++ - if test -n "$CPP11"; then CONFIGOPTS+=(--enable-cpp11-testing --without-maximum-compile-warnings "CXXFLAGS=-std=c++11 -Wall -Wextra" "CFLAGS=-std=c11 -Wall -Wextra") && export CSTD=c11 && export CPPSTD=c++11; fi
++ - if test -n "$CPP14"; then CONFIGOPTS+=(--enable-cpp11-testing --without-maximum-compile-warnings "CXXFLAGS=-std=c++14 -Wall -Wextra" "CFLAGS=-std=c11 -Wall -Wextra") && export CSTD=c11 && export CPPSTD=c++14; fi
++ - ls -la $(which $CC)
++ - ls -la $(which $CXX)
++ - $CC --version
++ - $CXX --version
++script:
++ - echo 'Configuring...' && echo -en 'travis_fold:start:script.1\\r'
++ - if test -n "$SWIGLANG"; then CONFIGOPTS+=(--without-alllang --with-$WITHLANG); fi
++ - echo "${CONFIGOPTS[@]}"
++ - ./autogen.sh && mkdir -p build/build && cd build/build && ../../configure "${CONFIGOPTS[@]}"
++ - echo -en 'travis_fold:end:script.1\\r'
++ - make -s $SWIGJOBS
++ - ./swig -version && ./swig -pcreversion
++ - if test -z "$SWIGLANG"; then make -s $SWIGJOBS check-ccache; fi
++ - if test -z "$SWIGLANG"; then make -s $SWIGJOBS check-errors-test-suite; fi
++ - echo 'Installing...' && echo -en 'travis_fold:start:script.2\\r'
++ - if test -z "$SWIGLANG"; then sudo make -s install && swig -version && ccache-swig -V; fi
++ - echo -en 'travis_fold:end:script.2\\r'
++ # Stricter compile flags for examples. Various headers and SWIG generated code prevents full use of -pedantic.
++ - if test -n "$SWIGLANG"; then cflags=$($TRAVIS_BUILD_DIR/Tools/testflags.py --language $SWIGLANG --cflags --std=$CSTD --compiler=$CC) && echo $cflags; fi
++ - if test -n "$SWIGLANG"; then cxxflags=$($TRAVIS_BUILD_DIR/Tools/testflags.py --language $SWIGLANG --cxxflags --std=$CPPSTD --compiler=$CC) && echo $cxxflags; fi
++ - if test -n "$SWIGLANG"; then make -s check-$SWIGLANG-version; fi
++ - if test -n "$SWIGLANG"; then make check-$SWIGLANG-enabled; fi
++ - if test -n "$SWIGLANG"; then make $SWIGJOBS check-$SWIGLANG-examples CFLAGS="$cflags" CXXFLAGS="$cxxflags"; fi
++ - if test -n "$SWIGLANG"; then make $SWIGJOBS check-$SWIGLANG-test-suite CFLAGS="$cflags" CXXFLAGS="$cxxflags"; fi
++ - echo 'Cleaning...' && echo -en 'travis_fold:start:script.3\\r'
++ - make check-maintainer-clean && ../../configure $CONFIGOPTS
++ - echo -en 'travis_fold:end:script.3\\r'
diff --git a/gnu/packages/swig.scm b/gnu/packages/swig.scm
index b931db412b..34163aa9e5 100644
--- a/gnu/packages/swig.scm
+++ b/gnu/packages/swig.scm
@@ -22,6 +22,7 @@
#:use-module (guix download)
#:use-module (guix licenses)
#:use-module (guix build-system gnu)
+ #:use-module (gnu packages)
#:use-module (gnu packages pcre)
#:use-module (gnu packages guile)
#:use-module (gnu packages boost)
@@ -39,7 +40,9 @@
name "-" version ".tar.gz"))
(sha256
(base32
- "0kf99ygrjs5616gsqhz1l7bib3a12izmxi7g48bwblbymr3z9ybw"))))
+ "0kf99ygrjs5616gsqhz1l7bib3a12izmxi7g48bwblbymr3z9ybw"))
+ (patches
+ (search-patches "swig-octave-patches.patch"))))
(build-system gnu-build-system)
(arguments
'(#:phases
diff --git a/gnu/packages/version-control.scm b/gnu/packages/version-control.scm
index 9ad4f3faca..3a2975ee75 100644
--- a/gnu/packages/version-control.scm
+++ b/gnu/packages/version-control.scm
@@ -142,14 +142,14 @@ as well as the classic centralized workflow.")
(name "git")
;; XXX When updating Git, check if the special 'git:src' input to cgit needs
;; to be updated as well.
- (version "2.17.0")
+ (version "2.17.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://kernel.org/software/scm/git/git-"
version ".tar.xz"))
(sha256
(base32
- "1ismz7nsz8dgjmk782xr9s0mr2qh06f72pdcgbxfmnw1bvlya5p9"))))
+ "0pm6bdnrrm165k3krnazxcxadifk2gqi30awlbcf9fism1x6w4vr"))))
(build-system gnu-build-system)
(native-inputs
`(("native-perl" ,perl)
@@ -162,7 +162,7 @@ as well as the classic centralized workflow.")
version ".tar.xz"))
(sha256
(base32
- "09rpjj0m97h5lpzpwk47m6xsz9gb8wqf1s3dfqma3mwav2pb3njb"))))))
+ "0m7grrwsqaihdgcgaicxiy4rlqjpa75n5wl6hi2qhi33xa34gmc3"))))))
(inputs
`(("curl" ,curl)
("expat" ,expat)
diff --git a/gnu/system/vm.scm b/gnu/system/vm.scm
index 4cffc71d7f..cf730d1f08 100644
--- a/gnu/system/vm.scm
+++ b/gnu/system/vm.scm
@@ -23,7 +23,6 @@
(define-module (gnu system vm)
#:use-module (guix config)
- #:use-module (guix docker)
#:use-module (guix store)
#:use-module (guix gexp)
#:use-module (guix derivations)