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authorRicardo Wurmus <rekado@elephly.net>2018-05-31 09:16:01 +0200
committerRicardo Wurmus <rekado@elephly.net>2018-05-31 13:24:17 +0200
commitbabeea3f9f46c1f1f812e590f46283e91684f327 (patch)
tree07ab6be03909d8f24b62f272e18d7873c84ecfd1
parent59f87b44da801a479f38c10f20025586259acf91 (diff)
downloadpatches-babeea3f9f46c1f1f812e590f46283e91684f327.tar
patches-babeea3f9f46c1f1f812e590f46283e91684f327.tar.gz
build-system/r: Use invoke.
* guix/build/r-build-system.scm (invoke-r): Use invoke. (pipe-to-r): Raise invoke-error on non-zero return value. (check): Unconditionally return #t.
-rw-r--r--guix/build/r-build-system.scm27
1 files changed, 17 insertions, 10 deletions
diff --git a/guix/build/r-build-system.scm b/guix/build/r-build-system.scm
index 5e18939d22..4d8ac5b479 100644
--- a/guix/build/r-build-system.scm
+++ b/guix/build/r-build-system.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -24,6 +24,7 @@
#:use-module (ice-9 popen)
#:use-module (srfi srfi-1)
#:use-module (srfi srfi-26)
+ #:use-module (srfi srfi-35)
#:export (%standard-phases
r-build))
@@ -34,12 +35,19 @@
;; Code:
(define (invoke-r command params)
- (zero? (apply system* "R" "CMD" command params)))
+ (apply invoke "R" "CMD" command params))
(define (pipe-to-r command params)
(let ((port (apply open-pipe* OPEN_WRITE "R" params)))
(display command port)
- (zero? (status:exit-val (close-pipe port)))))
+ (let ((code (status:exit-val (close-pipe port))))
+ (unless (zero? code)
+ (raise (condition ((@@ (guix build utils) &invoke-error)
+ (program "R")
+ (arguments (string-append params " " command))
+ (exit-status (status:exit-val code))
+ (term-signal (status:term-sig code))
+ (stop-signal (status:stop-sig code)))))))))
(define (generate-site-path inputs)
(string-join (map (match-lambda
@@ -68,13 +76,12 @@
(pkg-name (car (scandir libdir (negate (cut member <> '("." ".."))))))
(testdir (string-append libdir pkg-name "/" test-target))
(site-path (string-append libdir ":" (generate-site-path inputs))))
- (if (and tests? (file-exists? testdir))
- (begin
- (setenv "R_LIBS_SITE" site-path)
- (pipe-to-r (string-append "tools::testInstalledPackage(\"" pkg-name "\", "
- "lib.loc = \"" libdir "\")")
- '("--no-save" "--slave")))
- #t)))
+ (when (and tests? (file-exists? testdir))
+ (setenv "R_LIBS_SITE" site-path)
+ (pipe-to-r (string-append "tools::testInstalledPackage(\"" pkg-name "\", "
+ "lib.loc = \"" libdir "\")")
+ '("--no-save" "--slave")))
+ #t))
(define* (install #:key outputs inputs (configure-flags '())
#:allow-other-keys)