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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:41:48 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:41:48 +0100 |
| commit | f8780e96ff9c4d1439f679aff0df559d97d673dc (patch) | |
| tree | 4e0ecda0fd813b7eed8db4d606b8121b4887b9bd | |
| parent | 3a08940e1a38d1f15630b6ad6678b1a79d70049d (diff) | |
| download | patches-f8780e96ff9c4d1439f679aff0df559d97d673dc.tar patches-f8780e96ff9c4d1439f679aff0df559d97d673dc.tar.gz | |
gnu: r-org-dm-eg-db: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): ...to here.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 26 | ||||
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 26 |
2 files changed, 26 insertions, 26 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a55439b94e..f08e1a87c4 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -386,6 +386,32 @@ in Biostrings objects.") annotations for the genome of the model worm Caenorhabditis elegans.") (license license:artistic2.0))) +(define-public r-org-dm-eg-db + (package + (name "r-org-dm-eg-db") + (version "3.7.0") + (source (origin + (method url-fetch) + ;; We cannot use bioconductor-uri here because this tarball is + ;; located under "data/annotation/" instead of "bioc/". + (uri (string-append "https://www.bioconductor.org/packages/" + "release/data/annotation/src/contrib/" + "org.Dm.eg.db_" version ".tar.gz")) + (sha256 + (base32 + "1pqjrzlyg72bjpy8zsxvaglc7jsv176bnyi87xdajmkvsgxpm7b3")))) + (properties + `((upstream-name . "org.Dm.eg.db"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi))) + (home-page "https://www.bioconductor.org/packages/org.Dm.eg.db/") + (synopsis "Genome wide annotation for Fly") + (description + "This package provides mappings from Entrez gene identifiers to various +annotations for the genome of the model fruit fly Drosophila melanogaster.") + (license license:artistic2.0))) + (define-public r-org-dr-eg-db (package (name "r-org-dr-eg-db") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 9285d1889d..0fffbf82d0 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8006,32 +8006,6 @@ downloaded from Encode.") on mapping using Entrez Gene identifiers.") (license license:artistic2.0))) -(define-public r-org-dm-eg-db - (package - (name "r-org-dm-eg-db") - (version "3.7.0") - (source (origin - (method url-fetch) - ;; We cannot use bioconductor-uri here because this tarball is - ;; located under "data/annotation/" instead of "bioc/". - (uri (string-append "https://www.bioconductor.org/packages/" - "release/data/annotation/src/contrib/" - "org.Dm.eg.db_" version ".tar.gz")) - (sha256 - (base32 - "1pqjrzlyg72bjpy8zsxvaglc7jsv176bnyi87xdajmkvsgxpm7b3")))) - (properties - `((upstream-name . "org.Dm.eg.db"))) - (build-system r-build-system) - (propagated-inputs - `(("r-annotationdbi" ,r-annotationdbi))) - (home-page "https://www.bioconductor.org/packages/org.Dm.eg.db/") - (synopsis "Genome wide annotation for Fly") - (description - "This package provides mappings from Entrez gene identifiers to various -annotations for the genome of the model fruit fly Drosophila melanogaster.") - (license license:artistic2.0))) - (define-public r-org-mm-eg-db (package (name "r-org-mm-eg-db") |