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| author | Ricardo Wurmus <rekado@elephly.net> | 2017-04-08 10:24:04 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2017-04-08 10:25:50 +0200 |
| commit | 1d65b5379b33951298cb8a763e0140bb1ec43404 (patch) | |
| tree | ff155ca39aff844cdb48749e2b7582bcb6a9097a | |
| parent | 1c8ee3fcc2866e214ddf16596f26d8caad75999f (diff) | |
| download | patches-1d65b5379b33951298cb8a763e0140bb1ec43404.tar patches-1d65b5379b33951298cb8a763e0140bb1ec43404.tar.gz | |
gnu: r-vegan: Update to 2.4-3.
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-3.
[arguments]: Remove build phase "revert-test-deletion".
[native-inputs]: Remove "r-vegan-delete-tests-patch".
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 28 |
1 files changed, 3 insertions, 25 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 48cf12ff4d..3626db9aae 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5356,40 +5356,18 @@ information as possible.") (define-public r-vegan (package (name "r-vegan") - (version "2.4-2") + (version "2.4-3") (source (origin (method url-fetch) (uri (cran-uri "vegan" version)) (sha256 (base32 - "12wf64izrpq9z3ix7mgm5421mq0xsm8dw5qblvcrz452nfhjf5w9")))) + "15zcxfix2d854897k1lr0sfmj2n00339nlsppcr3zrb238lb2mi5")))) (build-system r-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'revert-test-deletion - ;; The distributed sources do not include tests with the CRAN - ;; package. Here we revert the commit - ;; `591d0e8ba1deaaf82445474ec6619c0b43db4e63' which deletes these - ;; tests. There are plans to not delete tests in future as - ;; documented at https://github.com/vegandevs/vegan/issues/181. - (lambda* (#:key inputs #:allow-other-keys) - (zero? - (system* "patch" "-R" "-p1" "-i" - (assoc-ref inputs "r-vegan-delete-tests-patch")))))))) (native-inputs `(("gfortran" ,gfortran) - ("r-knitr" ,r-knitr) - ("r-vegan-delete-tests-patch" - ,(origin - (method url-fetch) - (uri (string-append - "https://github.com/vegandevs/vegan/commit/" - "591d0e8ba1deaaf82445474ec6619c0b43db4e63.patch")) - (sha256 - (base32 - "0b1bi7y4jjdl3ph721vm9apm51dr2z9piwvhy4355sf2b4kyyj5a")))))) + ("r-knitr" ,r-knitr))) (propagated-inputs `(("r-cluster" ,r-cluster) ("r-lattice" ,r-lattice) |