diff options
| author | Marius Bakke <mbakke@fastmail.com> | 2019-07-18 23:29:07 +0200 |
|---|---|---|
| committer | Marius Bakke <mbakke@fastmail.com> | 2019-07-18 23:29:07 +0200 |
| commit | bc2076f053d66b8293db800710bc72a7f5617396 (patch) | |
| tree | fb0213bcc80d224ef92c3efcbc74e65f5db20bdb | |
| parent | 40a7153d198821c4111d5bb864f872d2df108013 (diff) | |
| download | patches-bc2076f053d66b8293db800710bc72a7f5617396.tar patches-bc2076f053d66b8293db800710bc72a7f5617396.tar.gz | |
gnu: bpp: Use the default GCC.
* gnu/packages/bioinformatics.scm (bpp-core, bpp-phyl, bpp-popgen, bpp-seq,
bppsuite)[inputs]: Remove GCC-5.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 17 |
1 files changed, 4 insertions, 13 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index bfac90ecf7..e25a4e1d60 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -1109,9 +1109,6 @@ relying on a complex dependency tree.") (build-system cmake-build-system) (arguments `(#:parallel-build? #f)) - (inputs - `(("gcc" ,gcc-5))) ; Compilation of bpp-phyl fails with GCC 4.9 so we - ; compile all of the bpp packages with GCC 5. (home-page "http://biopp.univ-montp2.fr") (synopsis "C++ libraries for Bioinformatics") (description @@ -1147,10 +1144,7 @@ providing them a set of re-usable tools.") #:out-of-source? #f)) (inputs `(("bpp-core" ,bpp-core) - ("bpp-seq" ,bpp-seq) - ;; GCC 4.8 fails due to an 'internal compiler error', so we use a more - ;; modern GCC. - ("gcc" ,gcc-5))) + ("bpp-seq" ,bpp-seq))) (home-page "http://biopp.univ-montp2.fr") (synopsis "Bio++ phylogenetic Library") (description @@ -1182,8 +1176,7 @@ library provides phylogenetics-related modules.") #:tests? #f)) ; There are no tests. (inputs `(("bpp-core" ,bpp-core) - ("bpp-seq" ,bpp-seq) - ("gcc" ,gcc-5))) + ("bpp-seq" ,bpp-seq))) (home-page "http://biopp.univ-montp2.fr") (synopsis "Bio++ population genetics library") (description @@ -1216,8 +1209,7 @@ library provides population genetics-related modules.") ;; so the tests fail. #:out-of-source? #f)) (inputs - `(("bpp-core" ,bpp-core) - ("gcc" ,gcc-5))) ; Use GCC 5 as per 'bpp-core'. + `(("bpp-core" ,bpp-core))) (home-page "http://biopp.univ-montp2.fr") (synopsis "Bio++ sequence library") (description @@ -1255,8 +1247,7 @@ library provides sequence-related modules.") `(("bpp-core" ,bpp-core) ("bpp-seq" ,bpp-seq) ("bpp-phyl" ,bpp-phyl) - ("bpp-phyl" ,bpp-popgen) - ("gcc" ,gcc-5))) + ("bpp-phyl" ,bpp-popgen))) (home-page "http://biopp.univ-montp2.fr") (synopsis "Bioinformatics tools written with the Bio++ libraries") (description |