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authorRicardo Wurmus <rekado@elephly.net>2017-01-16 12:18:51 +0100
committerRicardo Wurmus <rekado@elephly.net>2017-01-17 21:46:49 +0100
commit05c7e5fb76cf8ebc271595cf3e363e3b8678d7e0 (patch)
treef949ea69e9fd365d37ef961a0483dfd60b8e5364
parent5c9d15055f501868a72148619b5a6db7debd20b8 (diff)
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gnu: Add r-affy.
* gnu/packages/bioinformatics.scm (r-affy): New variable.
-rw-r--r--gnu/packages/bioinformatics.scm26
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6cc808c6a7..9e073843e2 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8304,3 +8304,29 @@ previously been used in XCMS.")
upon file format information. The primary focus is on accessing the CEL and
CDF file formats.")
(license license:lgpl2.0+)))
+
+(define-public r-affy
+ (package
+ (name "r-affy")
+ (version "1.52.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "affy" version))
+ (sha256
+ (base32
+ "1snq71ligf0wvaxa6zfrl13ydw0zfhspmhdyfk8q3ba3np4cz344"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-affyio" ,r-affyio)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-biocinstaller" ,r-biocinstaller)
+ ("r-preprocesscore" ,r-preprocesscore)
+ ("r-zlibbioc" ,r-zlibbioc)))
+ (home-page "http://bioconductor.org/packages/affy")
+ (synopsis "Methods for affymetrix oligonucleotide arrays")
+ (description
+ "This package contains functions for exploratory oligonucleotide array
+analysis.")
+ (license license:lgpl2.0+)))