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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-05-09 18:35:43 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-05-09 18:37:33 +0200 |
| commit | f895a7a4d41a37871b044e48984d460bc896db68 (patch) | |
| tree | 08a66a8de25479bcfea39f3e5397090258810db7 | |
| parent | 22103f16f213e5938a07c11e16059715a0a66dd0 (diff) | |
| download | patches-f895a7a4d41a37871b044e48984d460bc896db68.tar patches-f895a7a4d41a37871b044e48984d460bc896db68.tar.gz | |
gnu: trim-galore: Update to 0.4.5.
* gnu/packages/bioinformatics.scm (trim-galore): Update to 0.4.5.
[source]: Fetch from git.
[arguments]: Remove custom unpack phase.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 17 |
1 files changed, 7 insertions, 10 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 98149f2674..bba7056db2 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11141,25 +11141,22 @@ with narrow binding events such as transcription factor ChIP-seq.") (define-public trim-galore (package (name "trim-galore") - (version "0.4.2") + (version "0.4.5") (source (origin - (method url-fetch) - (uri (string-append "http://www.bioinformatics.babraham.ac.uk/" - "projects/trim_galore/trim_galore_v" - version ".zip")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/FelixKrueger/TrimGalore.git") + (commit version))) + (file-name (string-append name "-" version "-checkout")) (sha256 (base32 - "0b9qdxi4521gsrjvbhgky8g7kry9b5nx3byzaxkgxz7p4k8bn1mn")))) + "0x5892l48c816pf00wmnz5vq0zq6170d3xc8zrxncd4jcz7h1p71")))) (build-system gnu-build-system) (arguments `(#:tests? #f ; no tests #:phases (modify-phases %standard-phases - ;; The archive contains plain files. - (replace 'unpack - (lambda* (#:key source #:allow-other-keys) - (zero? (system* "unzip" source)))) (delete 'configure) (delete 'build) (add-after 'unpack 'hardcode-tool-references |