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| author | Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de> | 2016-09-21 22:45:23 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2016-09-26 03:21:19 +0200 |
| commit | 2301fd3e4d3d1789f63e19d9f46146e157d7e610 (patch) | |
| tree | 910764441d0c197ec181db38755852477165a1e6 | |
| parent | 2d21d44dbdf871e95bb416026d9075da93e460ec (diff) | |
| download | patches-2301fd3e4d3d1789f63e19d9f46146e157d7e610.tar patches-2301fd3e4d3d1789f63e19d9f46146e157d7e610.tar.gz | |
gnu: Add r-genefilter.
* gnu/packages/bioinformatics.scm (r-genefilter): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 8ed35a8fa3..f11a89ec45 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5099,6 +5099,32 @@ microarrays.") "This package provides functions for plotting genomic data.") (license license:artistic2.0))) +(define-public r-genefilter + (package + (name "r-genefilter") + (version "1.54.2") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "genefilter" version)) + (sha256 + (base32 + "1hmz6as0njvrsrdbgmk72jyclnnqvfdvp6kqv456h43ldq2ajfv5")))) + (build-system r-build-system) + (native-inputs + `(("gfortran" ,gfortran))) + (propagated-inputs + `(("r-annotate" ,r-annotate) + ("r-annotationdbi" ,r-annotationdbi) + ("r-biobase" ,r-biobase) + ("r-s4vectors" ,r-s4vectors))) + (home-page "http://bioconductor.org/packages/genefilter") + (synopsis "Filter genes from high-throughput experiments") + (description + "This package provides basic functions for filtering genes from +high-throughput sequencing experiments.") + (license license:artistic2.0))) + (define-public vsearch (package (name "vsearch") |