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| author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:05:43 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 21:07:49 +0100 |
| commit | 3d13b448e5e5a4eff7a94ca38ee051206daab96d (patch) | |
| tree | 2581243fcc232473aeecc0e390250812ec56a02e | |
| parent | 6aa896d82e60a2e45b644b2d485dc5fc6b901c0c (diff) | |
| download | patches-3d13b448e5e5a4eff7a94ca38ee051206daab96d.tar patches-3d13b448e5e5a4eff7a94ca38ee051206daab96d.tar.gz | |
gnu: r-copynumber: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 23 | ||||
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 23 |
2 files changed, 23 insertions, 23 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 49765096d9..bbfe68c5cc 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1204,6 +1204,29 @@ Viewer (SAV) files, access data, and generate QC plots.") sequencing data.") (license license:gpl2+))) +(define-public r-copynumber + (package + (name "r-copynumber") + (version "1.22.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "copynumber" version)) + (sha256 + (base32 + "0ipwj9i5p1bwhg5d80jdjagm02krpj2v0j47qdgw41h8wncdyal3")))) + (build-system r-build-system) + (propagated-inputs + `(("r-s4vectors" ,r-s4vectors) + ("r-iranges" ,r-iranges) + ("r-genomicranges" ,r-genomicranges) + ("r-biocgenerics" ,r-biocgenerics))) + (home-page "https://bioconductor.org/packages/copynumber") + (synopsis "Segmentation of single- and multi-track copy number data") + (description + "This package segments single- and multi-track copy number data by a +penalized least squares regression method.") + (license license:artistic2.0))) + (define-public r-dnacopy (package (name "r-dnacopy") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 4481235c78..09d3bf2090 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6347,29 +6347,6 @@ between two different types of motif instances using as much relevant information as possible.") (license (list license:gpl2+ license:gpl3+)))) -(define-public r-copynumber - (package - (name "r-copynumber") - (version "1.22.0") - (source (origin - (method url-fetch) - (uri (bioconductor-uri "copynumber" version)) - (sha256 - (base32 - "0ipwj9i5p1bwhg5d80jdjagm02krpj2v0j47qdgw41h8wncdyal3")))) - (build-system r-build-system) - (propagated-inputs - `(("r-s4vectors" ,r-s4vectors) - ("r-iranges" ,r-iranges) - ("r-genomicranges" ,r-genomicranges) - ("r-biocgenerics" ,r-biocgenerics))) - (home-page "https://bioconductor.org/packages/copynumber") - (synopsis "Segmentation of single- and multi-track copy number data") - (description - "This package segments single- and multi-track copy number data by a -penalized least squares regression method.") - (license license:artistic2.0))) - (define-public r-geneplotter (package (name "r-geneplotter") |