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| author | Ricardo Wurmus <rekado@elephly.net> | 2020-02-22 14:12:22 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-02-22 20:42:15 +0100 |
| commit | 8017eb0ae8d7fee1669e909b116670da374d0ce3 (patch) | |
| tree | d6537c13f6d4d2af669b34cc73df6de6f6d6acc5 | |
| parent | ae55cd9630f43ad974f5cdc0558cbf67b8f37c19 (diff) | |
| download | patches-8017eb0ae8d7fee1669e909b116670da374d0ce3.tar patches-8017eb0ae8d7fee1669e909b116670da374d0ce3.tar.gz | |
gnu: r-ggm: Move to (gnu packages bioconductor).
* gnu/packages/cran.scm (r-ggm): Move this variable from here...
* gnu/packages/bioconductor.scm (r-ggm): ...to here.
| -rw-r--r-- | gnu/packages/bioconductor.scm | 24 | ||||
| -rw-r--r-- | gnu/packages/cran.scm | 23 |
2 files changed, 24 insertions, 23 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index a6ee0253be..9546b466c4 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1569,6 +1569,30 @@ expressed genes in DNA microarray experiments.") "This package implements some simple graph handling capabilities for R.") (license license:artistic2.0))) +;; This is a CRAN package, but it depends on a Bioconductor package. +(define-public r-ggm + (package + (name "r-ggm") + (version "2.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "ggm" version)) + (sha256 + (base32 + "11wc6k2kj2ydy0dyks5mbvbhxm1r43id87anl1jg6dn0yv4m78di")))) + (properties `((upstream-name . "ggm"))) + (build-system r-build-system) + (propagated-inputs + `(("r-graph" ,r-graph) + ("r-igraph" ,r-igraph))) + (home-page "https://cran.r-project.org/package=ggm") + (synopsis "Functions for graphical Markov models") + (description + "This package provides functions and datasets for maximum likelihood +fitting of some classes of graphical Markov models.") + (license license:gpl2+))) + (define-public r-codedepends (package (name "r-codedepends") diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index f8eb99ddda..60947c5f3f 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -19965,29 +19965,6 @@ uses a trans-dimensional @dfn{Markov Chain Monte Carlo} (MCMC) approach based on a continuous-time birth-death process.") (license license:gpl2+))) -(define-public r-ggm - (package - (name "r-ggm") - (version "2.5") - (source - (origin - (method url-fetch) - (uri (cran-uri "ggm" version)) - (sha256 - (base32 - "11wc6k2kj2ydy0dyks5mbvbhxm1r43id87anl1jg6dn0yv4m78di")))) - (properties `((upstream-name . "ggm"))) - (build-system r-build-system) - (propagated-inputs - `(("r-graph" ,r-graph) - ("r-igraph" ,r-igraph))) - (home-page "https://cran.r-project.org/package=ggm") - (synopsis "Functions for graphical Markov models") - (description - "This package provides functions and datasets for maximum likelihood -fitting of some classes of graphical Markov models.") - (license license:gpl2+))) - (define-public r-d3network (package (name "r-d3network") |