From 1ad15c1669df7dad5bc234fb4f572e341bc04561 Mon Sep 17 00:00:00 2001
From: Hartmut Goebel <h.goebel@crazy-compilers.com>
Date: Sat, 16 Apr 2016 10:51:23 +0200
Subject: gnu: Rename Java packages to match new naming specification.

* gnu/packages/bioinformatics.scm (htsjdk): Rename to...
(java-htsjdk): ...this.
(ngs-java): Rename to...
(java-ngs): ...this.
(ncbi-vdb)[arguments,inputs]: Use new name.
* gnu/packages/java.scm (swt): Rename to...
(java-swt): ...this.
* gnu/packages/music.scm (tuxguitar)[make-flags,inputs,arguments]: Use
new name of package "swt".
---
 gnu/packages/bioinformatics.scm | 12 ++++++------
 gnu/packages/java.scm           |  4 ++--
 gnu/packages/music.scm          |  6 +++---
 3 files changed, 11 insertions(+), 11 deletions(-)

(limited to 'gnu')

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 082cdf8eba..c49b0a9e17 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -2144,9 +2144,9 @@ (define-public htseq
 from high-throughput sequencing assays.")
     (license license:gpl3+)))
 
-(define-public htsjdk
+(define-public java-htsjdk
   (package
-    (name "htsjdk")
+    (name "java-htsjdk")
     (version "1.129")
     (source (origin
               (method url-fetch)
@@ -3081,9 +3081,9 @@ (define-public ngs-sdk
 simultaneously.")
     (license license:public-domain)))
 
-(define-public ngs-java
+(define-public java-ngs
   (package (inherit ngs-sdk)
-    (name "ngs-java")
+    (name "java-ngs")
     (arguments
      `(,@(substitute-keyword-arguments
              `(#:modules ((guix build gnu-build-system)
@@ -3146,7 +3146,7 @@ (define-public ncbi-vdb
                     (string-append "--with-ngs-sdk-prefix="
                                    (assoc-ref inputs "ngs-sdk"))
                     (string-append "--with-ngs-java-prefix="
-                                   (assoc-ref inputs "ngs-java"))
+                                   (assoc-ref inputs "java-ngs"))
                     (string-append "--with-hdf5-prefix="
                                    (assoc-ref inputs "hdf5"))))))
         (alist-cons-after
@@ -3172,7 +3172,7 @@ (define-public ncbi-vdb
     (inputs
      `(("libxml2" ,libxml2)
        ("ngs-sdk" ,ngs-sdk)
-       ("ngs-java" ,ngs-java)
+       ("java-ngs" ,java-ngs)
        ("libmagic" ,file)
        ("hdf5" ,hdf5)))
     (native-inputs `(("perl" ,perl)))
diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm
index 7d8fb4fdfb..02131f10d0 100644
--- a/gnu/packages/java.scm
+++ b/gnu/packages/java.scm
@@ -51,9 +51,9 @@ (define-module (gnu packages java)
   #:use-module (gnu packages texinfo)
   #:use-module ((srfi srfi-1) #:select (fold alist-delete)))
 
-(define-public swt
+(define-public java-swt
   (package
-    (name "swt")
+    (name "java-swt")
     (version "4.4.2")
     (source (origin
               (method url-fetch)
diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm
index 280f3840bb..8f971f3614 100644
--- a/gnu/packages/music.scm
+++ b/gnu/packages/music.scm
@@ -775,7 +775,7 @@ (define-public tuxguitar
                           (string-append "PREFIX="
                                          (assoc-ref %outputs "out"))
                           (string-append "SWT_PATH="
-                                         (assoc-ref %build-inputs "swt")
+                                         (assoc-ref %build-inputs "java-swt")
                                          "/share/java/swt.jar"))
        #:tests? #f ;no "check" target
        #:parallel-build? #f ;not supported
@@ -790,11 +790,11 @@ (define-public tuxguitar
                (string-append "GCJFLAGS=-fsource=1.4 -fPIC " rest))
               (("PROPERTIES\\?=")
                (string-append "PROPERTIES?= -Dswt.library.path="
-                              (assoc-ref inputs "swt") "/lib"))
+                              (assoc-ref inputs "java-swt") "/lib"))
               (("\\$\\(GCJ\\) -o") "$(GCJ) $(LDFLAGS) -o"))
             #t)))))
     (inputs
-     `(("swt" ,swt)))
+     `(("java-swt" ,java-swt)))
     (native-inputs
      `(("gcj" ,gcj)
        ("pkg-config" ,pkg-config)))
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