From e86851ccb3df1e87efca7138ee8d055a30832a4e Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Wed, 26 Apr 2023 18:34:46 +0200 Subject: gnu: python-umap-learn: Patch for sklearn/numpy compatibility. * gnu/packages/machine-learning.scm (python-umap-learn)[arguments]: Add phase 'numpy-compatibility. --- gnu/packages/machine-learning.scm | 12 ++++++++++++ 1 file changed, 12 insertions(+) (limited to 'gnu/packages/machine-learning.scm') diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index b4751507b7..e7415bbc93 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -3131,6 +3131,18 @@ (define-public python-umap-learn (list #:phases #~(modify-phases %standard-phases + (add-after 'unpack 'numpy-compatibility + (lambda _ + (substitute* "umap/tests/test_umap_metrics.py" + ;; See commit a714b59bd9e2ca2e63312bc3491b2b037a42f2f2 + (("sparse_binary_data.todense\\(\\),") + "np.asarray(sparse_binary_data.todense()),") + ;; See commit c7d05683325589ad432a55e109cacb9d631cfaa9 + (("sparse_spatial_data.todense\\(\\),") + "np.asarray(sparse_spatial_data.todense()),")) + ;; See commit 949abd082524fce8c45dfb147bcd8e8ef49eade3 + (substitute* "umap/tests/test_umap_ops.py" + (("np.random,") "None,")))) ;; Numba needs a writable dir to cache functions. (add-before 'check 'set-numba-cache-dir (lambda _ -- cgit v1.2.3