From c034088e37b51018d5bfeb88d822c559b38d51db Mon Sep 17 00:00:00 2001
From: Efraim Flashner <efraim@flashner.co.il>
Date: Wed, 28 Feb 2024 11:50:05 +0200
Subject: gnu: bowtie1: Enable cross-compiling.

* gnu/packages/bioinformatics.scm (bowtie1)[arguments]: Adjust
make-flags to enable cross-compiling.

Change-Id: I6f5696e5ad6a1ea5b3f79e8dbbd162f0fe8d4905
---
 gnu/packages/bioinformatics.scm | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

(limited to 'gnu/packages/bioinformatics.scm')

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 85565f44bd..e7816eb1d1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3778,7 +3778,9 @@ gapped, local, and paired-end alignment modes.")
        ,#~(append #$(if (not (target-x86?))
                         #~'("POPCNT_CAPABILITY=0")
                         #~'())
-                  (list "CC=gcc" "all"
+                  (list (string-append "CC=" #$(cc-for-target))
+                        (string-append "CXX=" #$(cxx-for-target))
+                        "all"
                         (string-append "prefix=" #$output)))
        #:phases
        (modify-phases %standard-phases
-- 
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