From 74443c30f3e20655a046c0d3ea236822ef130968 Mon Sep 17 00:00:00 2001 From: Navid Afkhami Date: Fri, 9 Jun 2023 16:56:34 +0200 Subject: gnu: Add python-mudata. * gnu/packages/bioinformatics.scm (python-mudata): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioinformatics.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) (limited to 'gnu/packages/bioinformatics.scm') diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 38c5195146..9e356cba5d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3357,6 +3357,32 @@ (define-public python-mofax with MOFA+ in Python.") (license license:expat)))) +(define-public python-mudata + (package + (name "python-mudata") + (version "0.2.3") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/scverse/mudata") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "02h0k1q57589r0hdv8nwg1vk7g2ljvn5g66c47fy5gdilbm3gjws")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-anndata python-h5py python-pandas)) + (native-inputs + (list python-flit-core python-numpy python-pytest python-zarr)) + (home-page "https://github.com/scverse/mudata") + (synopsis "Python package for multi-omics data analysis") + (description + "Mudata is a Python package for multi-omics data analysis. +It is designed to provide functionality to load, process, and store multimodal +omics data.") + (license license:bsd-3))) + (define-public python-pyega3 (package (name "python-pyega3") -- cgit v1.2.3