From 7494f4b4ab94504ac1c8ac71d53ab6ab9c552da1 Mon Sep 17 00:00:00 2001 From: Mădălin Ionel Patrașcu Date: Mon, 2 May 2022 11:37:34 +0200 Subject: gnu: Add r-agimicrorna. * gnu/packages/bioconductor.scm (r-agimicrorna): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 2db0ab3752..80cf28c954 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1944,6 +1944,36 @@ (define-public r-adductomicsr mass spectrometry} (MS1) data.") (license license:artistic2.0))) +(define-public r-agimicrorna + (package + (name "r-agimicrorna") + (version "2.46.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "AgiMicroRna" version)) + (sha256 + (base32 + "0jic89gyphbv7jzlfgm9bh1aq48lp86rq6hr34gsg9z0pa1192xa")))) + (properties `((upstream-name . "AgiMicroRna"))) + (build-system r-build-system) + (propagated-inputs + (list r-affy + r-affycoretools + r-biobase + r-limma + r-preprocesscore)) + (home-page "https://git.bioconductor.org/packages/AgiMicroRna") + (synopsis + "Processing and differential expression analysis of Agilent microRNA chips") + (description + "@code{AgiMicroRna} provides useful functionality for the processing, +quality assessment and differential expression analysis of Agilent microRNA +array data. The package uses a limma-like structure to generate the processed +data in order to make statistical inferences about differential expression +using the linear model features implemented in limma. Standard Bioconductor +objects are used so that other packages could be used as well.") + (license license:gpl3))) + (define-public r-aneufinder (package (name "r-aneufinder") -- cgit v1.2.3