From 496a52dc410e287aa2bd03e962fdc110cfb2a1cc Mon Sep 17 00:00:00 2001 From: zimoun Date: Fri, 11 Sep 2020 20:08:42 +0200 Subject: gnu: r-qtl: Move to (gnu packages cran). * gnu/packages/bioinformatics.scm (r-qtl): Move from here... * gnu/packages/cran.scm (r-qtl): ...to here. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioinformatics.scm | 25 ------------------------- gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++ 2 files changed, 26 insertions(+), 25 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index cab3df222c..ae728f09dc 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8510,31 +8510,6 @@ Stephens (1990).") throughput genetic sequencing data sets using regression methods.") (license license:artistic2.0))) -(define-public r-qtl - (package - (name "r-qtl") - (version "1.46-2") - (source - (origin - (method url-fetch) - (uri (string-append "mirror://cran/src/contrib/qtl_" - version ".tar.gz")) - (sha256 - (base32 - "0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a")))) - (build-system r-build-system) - (home-page "https://rqtl.org/") - (synopsis "R package for analyzing QTL experiments in genetics") - (description "R/qtl is an extension library for the R statistics -system. It is used to analyze experimental crosses for identifying -genes contributing to variation in quantitative traits (so-called -quantitative trait loci, QTLs). - -Using a hidden Markov model, R/qtl estimates genetic maps, to -identify genotyping errors, and to perform single-QTL and two-QTL, -two-dimensional genome scans.") - (license license:gpl3))) - (define-public r-qtl2 (package (name "r-qtl2") diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0d10793e9f..980ad17594 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus ;;; Copyright © 2015 Andreas Enge +;;; Copyright © 2015, 2016 Pjotr Prins ;;; Copyright © 2016, 2017 Ben Woodcroft ;;; Copyright © 2016, 2017, 2018, 2020 Roel Janssen ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice @@ -24330,3 +24331,28 @@ are tests where the test statistic is the sum of the product of a covariate (usually group indicator) and the scores.") ;; Any version of the GPL (license license:gpl2+))) + +(define-public r-qtl + (package + (name "r-qtl") + (version "1.46-2") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://cran/src/contrib/qtl_" + version ".tar.gz")) + (sha256 + (base32 + "0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a")))) + (build-system r-build-system) + (home-page "https://rqtl.org/") + (synopsis "R package for analyzing QTL experiments in genetics") + (description "R/qtl is an extension library for the R statistics +system. It is used to analyze experimental crosses for identifying +genes contributing to variation in quantitative traits (so-called +quantitative trait loci, QTLs). + +Using a hidden Markov model, R/qtl estimates genetic maps, to +identify genotyping errors, and to perform single-QTL and two-QTL, +two-dimensional genome scans.") + (license license:gpl3))) -- cgit v1.2.3