| Commit message (Collapse) | Author | Age |
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* gnu/packages/cran.scm (r-usethis): Update to 2.1.5.
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* gnu/packages/cran.scm (r-gert): Update to 1.5.0.
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* gnu/packages/cran.scm (r-credentials): Update to 1.3.2.
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* gnu/packages/cran.scm (r-fs): Update to 1.5.2.
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* gnu/packages/cran.scm (r-sjplot): Update to 2.8.10.
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* gnu/packages/cran.scm (r-emmeans): Update to 1.7.2.
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* gnu/packages/cran.scm (r-multcomp): Update to 1.4-18.
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* gnu/packages/cran.scm (r-abundant): Update to 1.2.
[propagated-inputs]: Remove r-quic; add r-glasso.
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* gnu/packages/cran.scm (r-raster): Update to 3.5-11.
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* gnu/packages/cran.scm (r-argparse): Update to 2.1.3.
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* gnu/packages/cran.scm (r-sjmisc): Update to 2.8.9.
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* gnu/packages/cran.scm (r-rdpack): Update to 2.1.3.
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* gnu/packages/cran.scm (r-rbibutils): Update to 2.2.7.
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* gnu/packages/cran.scm (r-renv): Update to 0.15.0.
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* gnu/packages/cran.scm (r-dtplyr): Update to 1.2.0.
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* gnu/packages/cran.scm (r-openxlsx): Update to 4.2.5.
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* gnu/packages/cran.scm (r-arules): Update to 1.7-2.
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* gnu/packages/cran.scm (r-ttr): Update to 0.24.3.
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* gnu/packages/cran.scm (r-tinytex): Update to 0.36.
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* gnu/packages/cran.scm (r-xfun): Update to 0.29.
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* gnu/packages/cran.scm (r-venndiagram): Update to 1.7.1.
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* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.4.
[propagated-inputs]: Add r-nnet.
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* gnu/packages/cran.scm (r-mice): Update to 3.14.0.
[propagated-inputs]: Add r-withr.
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* gnu/packages/cran.scm (r-broom): Update to 0.7.11.
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* gnu/packages/cran.scm (r-rmysql): Update to 0.10.23.
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* gnu/packages/cran.scm (r-dimred): Update to 0.2.4.
[native-inputs]: Add r-knitr.
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* gnu/packages/cran.scm (r-progressr): Update to 0.10.0.
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* gnu/packages/cran.scm (r-suppdists): Update to 1.1-9.7.
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* gnu/packages/cran.scm (r-pkgload): Update to 1.2.4.
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* gnu/packages/cran.scm (r-pkgbuild): Update to 1.3.1.
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* gnu/packages/cran.scm (r-glue): Update to 1.6.0.
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* gnu/packages/cran.scm (r-ape): Update to 5.6.
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* gnu/packages/cran.scm (r-shadowtext): Update to 0.1.0.
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* gnu/packages/cran.scm (r-ggpmisc): Update to 0.4.5.
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* gnu/packages/cran.scm (r-ggpp): Update to 0.4.3.
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* gnu/packages/cran.scm (r-v8): Update to 4.0.0.
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* gnu/packages/cran.scm (r-rticles): Update to 0.22.
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* gnu/packages/cran.scm (r-datawizard): Update to 0.2.2.
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* gnu/packages/cran.scm (r-brio): Update to 1.1.3.
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* gnu/packages/cran.scm (r-httpuv): Update to 1.6.4.
* gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch: Adjust to version
1.6.4.
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* gnu/packages/cran.scm (r-densestbayes): New variable.
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* gnu/packages/cran.scm (r-matrixextra): New variable.
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* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.0.3.
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* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.2.
[propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38,
r-bsgenome-mmusculus-ucsc-mm9, and r-bsgenome-mmusculus-ucsc-mm10.
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* gnu/packages/cran.scm (r-valr): Move from here...
* gnu/packages/bioconductor.scm (r-valr): ...to here. Update to 0.6.4.
[propagated-inputs]: Add r-rtracklayer.
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* gnu/packages/statistics.scm (r-openssl)[arguments]: Add phase to disable
versioned linking.
[inputs]: Replace libressl with openssl.
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* gnu/packages/statistics.scm (r-openssl): Update to 1.4.6.
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* guix/upstream.scm (changed-inputs): Add match clauses for new-style input
lists.
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* tests/upstream.scm ("changed-inputs returns changes to plain input list",
"changed-inputs returns changes to all plain input lists"): New tests.
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All these tests pass, because they only test the old-style input alists with
labels.
* tests/upstream.scm ("changed-inputs returns no changes",
"changed-inputs returns changes to labelled input list",
"changed-inputs returns changes to all labelled input lists"): New tests.
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