| Commit message (Collapse) | Author | Age |
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* gnu/packages/package-management.scm (guix): Update to 846403e.
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This is a follow-up to 8422a67dc16af4dd5eb82180463aa7a0b362d5b9.
* gnu/services/docker.scm (docker-service-type): Use a composed list for
packages in profile-service-type.
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* gnu/packages/maven.scm (maven-compiler-plugin)[source]: Download using
git-fetch.
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* gnu/packages/maven.scm (maven-resources-plugin)[source]: Download
using git-fetch.
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* gnu/packages/maven.scm (maven-jar-plugin)[source]: Download using
git-fetch.
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* gnu/packages/java.scm (java-hdrhistogram)[source]: Download using
git-fetch.
[arguments]: Add phase to make source writable.
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This is a follow-up to commit 6e0ab26f31cd2bb7e5d88719d3d458df68c1963e.
* gnu/packages/cran.scm (r-wgcna): Move from here...
* gnu/packages/bioconductor.scm (r-wgcna): ...to here.
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* gnu/packages/bioinformatics.scm (r-fithic): Move from here...
* gnu/packages/bioconductor.scm (r-fithic): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-hitc): Move from here...
* gnu/packages/bioconductor.scm (r-hitc): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-hdf5array): Move from here...
* gnu/packages/bioconductor.scm (r-hdf5array): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-rhdf5lib): Move from here...
* gnu/packages/bioconductor.scm (r-rhdf5lib): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-beachmat): Move from here...
* gnu/packages/bioconductor.scm (r-beachmat): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Move from here...
* gnu/packages/bioconductor.scm (r-singlecellexperiment): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-scater): Move from here...
* gnu/packages/bioconductor.scm (r-scater): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-scran): Move from here...
* gnu/packages/bioconductor.scm (r-scran): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Move from here...
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/graph.scm (r-rgraphviz): Move from here...
* gnu/packages/bioconductor.scm (r-rgraphviz): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/statistics.scm (r-preprocesscore): Move from here...
* gnu/packages/bioconductor.scm (r-preprocesscore): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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* gnu/packages/cran.scm (r-fourcseq): Move from here...
* gnu/packages/bioconductor.scm (r-fourcseq): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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Fixes <https://bugs.gnu.org/43398>.
* gnu/packages/graph.scm (r-rgraphviz)[arguments]: Add phase
"make-reproducible".
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* gnu/packages/statistics.scm (r-quantreg): Update to 5.67.
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* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.0.
[native-inputs]: Add r-knitr.
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* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.900.3.0.
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* gnu/packages/statistics.scm (r-ggdendro): Update to 0.1.22.
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* gnu/packages/statistics.scm (r-stringi): Update to 1.5.3.
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* gnu/packages/statistics.scm (r-mass): Update to 7.3-53.
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* gnu/packages/cran.scm (r-diversitree): Update to 0.9-14.
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* gnu/packages/cran.scm (r-seurat): Update to 3.2.1.
[propagated-inputs]: Remove r-ape; add r-matrixstats.
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* gnu/packages/cran.scm (r-rfast): Update to 2.0.1.
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* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.5.
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* gnu/packages/cran.scm (r-forecast): Update to 8.13.
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* gnu/packages/cran.scm (r-gamlss): Update to 5.2-0.
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* gnu/packages/cran.scm (r-parameters): Update to 0.8.5.
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* gnu/packages/cran.scm (r-systemfonts): Update to 0.3.1.
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* gnu/packages/cran.scm (r-dalex): Update to 2.0.
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* gnu/packages/cran.scm (r-sf): Update to 0.9-6.
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* gnu/packages/cran.scm (r-deldir): Update to 0.1-29.
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* gnu/packages/cran.scm (r-shinyjs): Update to 2.0.0.
[native-inputs]: Add r-knitr.
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* gnu/packages/cran.scm (r-etm): Update to 1.1.1.
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* gnu/packages/cran.scm (r-fields): Update to 11.4.
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* gnu/packages/cran.scm (r-rnifti): Update to 1.2.2.
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* gnu/packages/cran.scm (r-misc3d): Update to 0.9-0.
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* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.3.0.
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* gnu/packages/cran.scm (r-ggeffects): Update to 0.16.0.
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* gnu/packages/cran.scm (r-performance): Update to 0.5.0.
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* gnu/packages/cran.scm (r-mosaicdata): Update to 0.20.1.
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* gnu/packages/cran.scm (r-mosaiccore): Update to 0.8.0.
[propagated-inputs]: Remove r-lazyeval.
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* gnu/packages/cran.scm (r-flextable): Update to 0.5.11.
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* gnu/packages/cran.scm (r-insight): Update to 0.9.5.
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* gnu/packages/cran.scm (r-officer): Update to 0.3.14.
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