diff options
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/mpi.scm | 71 |
1 files changed, 40 insertions, 31 deletions
diff --git a/gnu/packages/mpi.scm b/gnu/packages/mpi.scm index 5cf9485b5e..bc1fd797d6 100644 --- a/gnu/packages/mpi.scm +++ b/gnu/packages/mpi.scm @@ -339,37 +339,46 @@ software vendors, application developers and computer science researchers.") (outputs '("out" "debug")) (arguments - (substitute-keyword-arguments (package-arguments openmpi) - ((#:configure-flags _) - #~(list "--enable-mpi-ext=affinity" ;cr doesn't work - "--with-sge" - - #$@(if (package? (this-package-input "valgrind")) - #~("--enable-memchecker" - "--with-valgrind") - #~("--without-valgrind")) - - "--with-hwloc=external" - "--with-libevent" - - ;; This replaces --enable-mpirun-prefix-by-default wich is deprecated - ;; since 5.x. - "--enable-prte-prefix-by-default" - - ;; Enable support for the 'Process Management Interface for Exascale' - ;; (PMIx) used e.g. by Slurm for the management communication and - ;; coordination of MPI processes. - (string-append "--with-pmix=" #$(this-package-input "openpmix")) - (string-append "--with-prrte=" #$(this-package-input "prrte")) - - ;; Since 5.x, Infiniband support is provided by ucx. - ;; See https://docs.open-mpi.org/en/main/release-notes/networks.html#miscellaneous-network-notes - (string-append "--with-ucx=" #$(this-package-input "ucx")))) - - ((#:phases phases) - #~(modify-phases #$phases - (delete 'remove-absolute) - (delete 'scrub-timestamps))))))) + (list #:configure-flags + #~(list "--enable-mpi-ext=affinity" ;cr doesn't work + "--with-sge" + + #$@(if (package? (this-package-input "valgrind")) + #~("--enable-memchecker" + "--with-valgrind") + #~("--without-valgrind")) + + "--with-hwloc=external" + "--with-libevent" + + ;; This replaces --enable-mpirun-prefix-by-default wich is deprecated + ;; since 5.x. + "--enable-prte-prefix-by-default" + + ;; Enable support for the 'Process Management Interface for Exascale' + ;; (PMIx) used e.g. by Slurm for the management communication and + ;; coordination of MPI processes. + (string-append "--with-pmix=" #$(this-package-input "openpmix")) + (string-append "--with-prrte=" #$(this-package-input "prrte")) + + ;; Since 5.x, Infiniband support is provided by ucx. + ;; See https://docs.open-mpi.org/en/main/release-notes/networks.html#miscellaneous-network-notes + (string-append "--with-ucx=" #$(this-package-input "ucx"))) + + #:phases + #~(modify-phases %standard-phases + (add-before 'build 'remove-absolute + (lambda _ + ;; Remove compiler absolute file names (OPAL_FC_ABSOLUTE + ;; etc.) to reduce the closure size. See + ;; <https://lists.gnu.org/archive/html/guix-devel/2017-07/msg00388.html> + ;; and + ;; <https://www.mail-archive.com/users@lists.open-mpi.org//msg31397.html>. + (substitute* '("oshmem/tools/oshmem_info/param.c" + "ompi/tools/ompi_info/param.c") + (("_ABSOLUTE") ""))))) + + #:disallowed-references (list (canonical-package gcc)))))) (define-public openmpi-c++ (package/inherit openmpi |