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-rw-r--r--gnu/packages/maths.scm50
1 files changed, 38 insertions, 12 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 10b1e9be45..19ed44f2c9 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -11,6 +11,8 @@
;;; Copyright © 2015, 2016 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015 Fabian Harfert <fhmgufs@web.de>
;;; Copyright © 2016 Roel Janssen <roel@gnu.org>
+;;; Copyright © 2016 Kei Kebreau <kei@openmailbox.org>
+;;; Copyright © 2016 Ludovic Courtès <ludo@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -46,6 +48,7 @@
#:use-module (gnu packages cmake)
#:use-module (gnu packages compression)
#:use-module (gnu packages curl)
+ #:use-module (gnu packages cyrus-sasl)
#:use-module (gnu packages documentation)
#:use-module (gnu packages elf)
#:use-module (gnu packages flex)
@@ -79,6 +82,7 @@
#:use-module (gnu packages tcl)
#:use-module (gnu packages texinfo)
#:use-module (gnu packages texlive)
+ #:use-module (gnu packages tls)
#:use-module (gnu packages wxwidgets)
#:use-module (gnu packages xml)
#:use-module (gnu packages zip)
@@ -583,7 +587,7 @@ online as well as original implementations of various other algorithms.")
(define-public octave
(package
(name "octave")
- (version "4.0.0")
+ (version "4.0.2")
(source
(origin
(method url-fetch)
@@ -591,7 +595,7 @@ online as well as original implementations of various other algorithms.")
version ".tar.gz"))
(sha256
(base32
- "101jr9yck798586jz4vkjcgk36zksmxf1pxrzvipgn2xgyay0zjc"))))
+ "1hdxap3j88rpqjimnfhinym6z73wdi5dfa6fv85c13r1dk9qzk9r"))))
(build-system gnu-build-system)
(inputs
`(("lapack" ,lapack)
@@ -602,6 +606,7 @@ online as well as original implementations of various other algorithms.")
("arpack" ,arpack-ng)
("curl" ,curl)
("pcre" ,pcre)
+ ("cyrus-sasl" ,cyrus-sasl)
("fltk" ,fltk)
("fontconfig" ,fontconfig)
("freetype" ,freetype)
@@ -609,6 +614,7 @@ online as well as original implementations of various other algorithms.")
("libxft" ,libxft)
("mesa" ,mesa)
("glu" ,glu)
+ ("openssl" ,openssl)
("zlib" ,zlib)))
(native-inputs
`(("gfortran" ,gfortran)
@@ -626,9 +632,10 @@ online as well as original implementations of various other algorithms.")
("ghostscript" ,ghostscript)
("gnuplot" ,gnuplot)))
(arguments
- `(#:configure-flags (list (string-append "--with-shell="
- (assoc-ref %build-inputs "bash")
- "/bin/sh"))))
+ `(#:configure-flags
+ (list (string-append "--with-shell="
+ (assoc-ref %build-inputs "bash")
+ "/bin/sh"))))
(home-page "http://www.gnu.org/software/octave/")
(synopsis "High-level language for numerical computation")
(description "GNU Octave is a high-level interpreted language that is
@@ -664,6 +671,9 @@ script files.")
("glu" ,glu)
("libx11" ,libx11)
("libxext" ,libxext)))
+ (inputs
+ `(("fontconfig" ,fontconfig)
+ ("libxft" ,libxft)))
(arguments
`(#:configure-flags `("-DENABLE_METIS:BOOL=OFF"
"-DENABLE_BUILD_SHARED:BOOL=ON"
@@ -1588,7 +1598,7 @@ point numbers.")
(define-public wxmaxima
(package
(name "wxmaxima")
- (version "15.04.0")
+ (version "16.04.2")
(source
(origin
(method url-fetch)
@@ -1596,7 +1606,7 @@ point numbers.")
version "/" name "-" version ".tar.gz"))
(sha256
(base32
- "1fm47ah4aw5qdjqhkz67w5fwhy8yfffa5z896crp0d3hk2bh4180"))))
+ "1fpqzk1921isiqrpgpf433ldq41924qs9sy99fl1zn5661b2l73n"))))
(build-system gnu-build-system)
(inputs
`(("wxwidgets" ,wxwidgets)
@@ -1631,14 +1641,14 @@ full text searching.")
(define-public armadillo
(package
(name "armadillo")
- (version "6.700.4")
+ (version "6.700.7")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/arma/armadillo-"
version ".tar.gz"))
(sha256
(base32
- "0dsdjcps5l2nhg0455rrc708inffarzj7n435vj4sm9lxwf21wg9"))))
+ "0xbidcxrvbq33xf7iysg2nic2ai9a043psl33kiv6ifkk7p8hcra"))))
(build-system cmake-build-system)
(arguments `(#:tests? #f)) ;no test target
(inputs
@@ -1659,14 +1669,14 @@ associated functions (eg. contiguous and non-contiguous submatrix views).")
(define-public armadillo-for-rcpparmadillo
(package (inherit armadillo)
- (version "6.700.3")
+ (version "6.700.6")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/arma/armadillo-"
version ".tar.gz"))
(sha256
(base32
- "1vnhifa7d0aij3kv5bxf6m91d99h3y2fyj48jrx7jcvwyb1q5wwq"))))))
+ "1cdpjxb0fz5f28y5qrqgpw53s7qi8s2v3al9lfdldqxngb21vpx8"))))))
(define-public muparser
(package
@@ -2199,7 +2209,23 @@ in finite element programs.")
;; ("python2-numpy" ,python2-numpy) ; only required for the tests
("zlib" ,zlib)))
(arguments
- `(#:tests? #f)) ; The test data are downloaded from the Internet.
+ `(;; The 'share/flann/octave' contains a .mex file, which is an ELF file
+ ;; taken 46 MiB unstripped, and 6 MiB stripped.
+ #:strip-directories '("lib" "lib64" "libexec"
+ "bin" "sbin" "share/flann/octave")
+
+ ;; Save 12 MiB by not installing .a files. Passing
+ ;; '-DBUILD_STATIC_LIBS=OFF' has no effect.
+ #:phases (modify-phases %standard-phases
+ (add-after 'install 'remove-static-libraries
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (lib (string-append out "/lib")))
+ (for-each delete-file
+ (find-files lib "\\.a$"))
+ #t))))
+
+ #:tests? #f)) ; The test data are downloaded from the Internet.
(home-page "http://www.cs.ubc.ca/research/flann/")
(synopsis "Library for approximate nearest neighbors computation")
(description "FLANN is a library for performing fast approximate