diff options
| -rw-r--r-- | gnu/packages/python-science.scm | 63 |
1 files changed, 63 insertions, 0 deletions
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index fdfd03d424..428452909a 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -12,6 +12,7 @@ ;;; Copyright © 2020, 2021 Vinicius Monego <monego@posteo.net> ;;; Copyright © 2021 Greg Hogan <code@greghogan.com> ;;; Copyright © 2021 Roel Janssen <roel@gnu.org> +;;; Copyright © 2021 Paul Garlick <pgarlick@tourbillion-technology.com> ;;; ;;; This file is part of GNU Guix. ;;; @@ -34,13 +35,17 @@ #:use-module (gnu packages base) #:use-module (gnu packages check) #:use-module (gnu packages gcc) + #:use-module (gnu packages image-processing) #:use-module (gnu packages maths) + #:use-module (gnu packages mpi) #:use-module (gnu packages perl) + #:use-module (gnu packages pkg-config) #:use-module (gnu packages python) #:use-module (gnu packages python-build) #:use-module (gnu packages python-check) #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) + #:use-module (gnu packages simulation) #:use-module (gnu packages sphinx) #:use-module (gnu packages time) #:use-module (gnu packages xdisorg) @@ -48,6 +53,7 @@ #:use-module (gnu packages xorg) #:use-module (guix packages) #:use-module (guix download) + #:use-module (guix git-download) #:use-module (guix utils) #:use-module (guix build-system python)) @@ -639,3 +645,60 @@ annotations on an existing boxplots and barplots generated by seaborn.") UpSet plots are used to visualize set overlaps; like Venn diagrams but more readable.") (license license:bsd-3))) + +(define-public python-vedo + (package + (name "python-vedo") + (version "2021.0.3") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/marcomusy/vedo") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "18i3ajh5jzhpc86di15lwh4jv97jhm627ii877sa4yhv6abzjfpn")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-after 'build 'mpi-setup + ,%openmpi-setup) + (replace 'check + (lambda* (#:key inputs outputs #:allow-other-keys) + (setenv "HOME" (getcwd)) + (add-installed-pythonpath inputs outputs) + (with-directory-excursion "tests" + (for-each (lambda (dir) + (with-directory-excursion dir + (invoke "./run_all.sh"))) + '("common" "dolfin"))) + #t))))) + (inputs ; for the check phase + `(("dolfin" ,fenics) + ("pkgconfig" ,python-pkgconfig) + ("pkg-config" ,pkg-config) + ("matplotlib" ,python-matplotlib))) + (propagated-inputs + `(("numpy" ,python-numpy) + ("vtk" ,vtk))) + (home-page "https://github.com/marcomusy/vedo") + (synopsis + "Analysis and visualization of 3D objects and point clouds") + (description + "@code{vedo} is a fast and lightweight python module for +scientific analysis and visualization. The package provides a wide +range of functionalities for working with three-dimensional meshes and +point clouds. It can also be used to generate high quality +two-dimensional renderings such as scatter plots and histograms. +@code{vedo} is based on @code{vtk} and @code{numpy}, with no other +dependencies.") + ;; vedo is released under the Expat license. Included fonts are + ;; covered by the OFL license and textures by the CC0 license. + ;; The earth images are in the public domain. + (license (list license:expat + license:silofl1.1 + license:cc0 + license:public-domain)))) |