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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-11-15 11:02:45 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-11-15 11:03:24 +0100 |
| commit | 02db3f51b7a33a85caa982e63c98d7effbe1a9a9 (patch) | |
| tree | 23fbf4f1abbe7f5ab40334619ad2dc50fd647440 /gnu/packages | |
| parent | 92af171860ff7d78e735a262a59c52bba721baaa (diff) | |
| download | guix-02db3f51b7a33a85caa982e63c98d7effbe1a9a9.tar guix-02db3f51b7a33a85caa982e63c98d7effbe1a9a9.tar.gz | |
gnu: Add r-disgenet2r.
* gnu/packages/bioinformatics.scm (r-disgenet2r): New variable.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 40 |
1 files changed, 40 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index a8ebd62331..e411839043 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12101,6 +12101,46 @@ including: ;; the GPL, but the license headers include the "or later" clause. (license license:gpl3+))) +(define-public r-disgenet2r + (let ((commit "8d8ce37da7384004038b25e784b9f7cfe2353de1") + (revision "1")) + (package + (name "r-disgenet2r") + (version (git-version "0.99.2" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://bitbucket.org/ibi_group/disgenet2r") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0dvk75s6wqssdyfn5iczldb8krvrz2s0dslxns4571cb2pr09b84")))) + (properties `((upstream-name . "disgenet2r"))) + (build-system r-build-system) + (propagated-inputs (list r-data-table + r-ggplot2 + r-gtable + r-httr + r-igraph + r-jsonlite + r-purrr + r-reshape + r-reshape2 + r-sparql + r-stringr + r-tidyr + r-tidyverse + r-venndiagram)) + (native-inputs (list r-knitr)) + (home-page "https://bitbucket.org/ibi_group/disgenet2r") + (synopsis "Query, visualize, and expand DisGeNET data") + (description + "This is an R package to query and expand DisGeNET data, and to +visualize the results within R framework. The disgenet2r package is designed +to retrieve data from DisGeNET v6.0 (Jan, 2019).") + (license license:expat)))) + (define-public r-dyngen (package (name "r-dyngen") |