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| author | Ricardo Wurmus <rekado@elephly.net> | 2021-10-18 20:51:00 +0000 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2021-10-19 06:28:30 +0000 |
| commit | 174c29a8e09456618eacabe15c8d4a1b0e5a6b10 (patch) | |
| tree | a2ddf8292f2c3478d50c7140f5743d28b87ab389 /gnu/packages/bioinformatics.scm | |
| parent | 0ceb01a1ed86df0b7f5e57d90efba1949f73e480 (diff) | |
| download | guix-174c29a8e09456618eacabe15c8d4a1b0e5a6b10.tar guix-174c29a8e09456618eacabe15c8d4a1b0e5a6b10.tar.gz | |
gnu: salmon: Use older version of TBB.
* gnu/packages/bioinformatics.scm (salmon)[arguments]: Define
HAVE_NUMERIC_LIMITS128; compute TBB_VERSION.
[inputs]: Replace tbb with tbb-for-salmon.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7b41c06bf6..816e64aedb 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9726,9 +9726,10 @@ The following file formats are supported: `(#:configure-flags (list (string-append "-Dlibgff_DIR=" (assoc-ref %build-inputs "libgff") "/lib") + "-DCMAKE_CXX_FLAGS=\"-DHAVE_NUMERIC_LIMITS128=1\"" "-Dlibgff_FOUND=TRUE" "-DTBB_FOUND=TRUE" - "-DTBB_VERSION=2020.3" + ,(string-append "-DTBB_VERSION=" (package-version tbb-for-salmon)) "-DTBB_LIBRARIES=tbb -ltbbmalloc" "-DFETCHED_PUFFERFISH=TRUE" "-DUSE_SHARED_LIBS=TRUE") @@ -9822,7 +9823,7 @@ The following file formats are supported: (sha256 (base32 "0qb4a2nl1d59qasr17sslgxnkjd5kbk5mns4cjshrmsvkrqp995n")))) - ("tbb" ,tbb) + ("tbb" ,tbb-for-salmon) ("libstadenio-for-salmon" ,libstadenio-for-salmon) ("xz" ,xz) ("zlib" ,zlib))) |