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| author | zimoun <zimon.toutoune@gmail.com> | 2020-09-14 18:07:43 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-09-14 21:39:30 +0200 |
| commit | 8863c14cd856d917552017646dbf4a36654e9515 (patch) | |
| tree | 8d3ec6c19baa7a0d5807a74d88b027a7225ff8ad /gnu/packages/bioconductor.scm | |
| parent | 916a3e59ab1df1d530f7558b8d653d01a846ee1b (diff) | |
| download | guix-8863c14cd856d917552017646dbf4a36654e9515.tar guix-8863c14cd856d917552017646dbf4a36654e9515.tar.gz | |
gnu: r-beachmat: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-beachmat): Move from here...
* gnu/packages/bioconductor.scm (r-beachmat): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioconductor.scm')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 25 |
1 files changed, 25 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index fbdb7eedb2..2796f4f90e 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8347,6 +8347,31 @@ routines.") objects from the @code{graph} package.") (license license:epl1.0))) +(define-public r-beachmat + (package + (name "r-beachmat") + (version "2.4.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "beachmat" version)) + (sha256 + (base32 + "1vl6jbf9ia78cm4ikdb8vz04jv4b46zhvg5i006c63a9pzw7zhxi")))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics) + ("r-delayedarray" ,r-delayedarray) + ("r-matrix" ,r-matrix))) + (native-inputs + `(("r-knitr" ,r-knitr))) + (home-page "https://bioconductor.org/packages/beachmat") + (synopsis "Compiling Bioconductor to handle each matrix type") + (description "This package provides a consistent C++ class interface for a +variety of commonly used matrix types, including sparse and HDF5-backed +matrices.") + (license license:gpl3))) + (define-public r-singlecellexperiment (package (name "r-singlecellexperiment") |