aboutsummaryrefslogtreecommitdiff
path: root/gnu/local.mk
diff options
context:
space:
mode:
authorEfraim Flashner <efraim@flashner.co.il>2021-01-17 15:31:21 +0200
committerEfraim Flashner <efraim@flashner.co.il>2021-01-17 15:47:32 +0200
commitfc9fd5496f33f697f4dc1e0dc1f20ba62c15726a (patch)
tree4d398aab6234f711ad2bbbc5e2bc85105fec7763 /gnu/local.mk
parent3ddeefe854a9f0fc3e33998f001e8445ee72a9f0 (diff)
downloadguix-fc9fd5496f33f697f4dc1e0dc1f20ba62c15726a.tar
guix-fc9fd5496f33f697f4dc1e0dc1f20ba62c15726a.tar.gz
gnu: freebayes: Update to 1.3.3.
* gnu/packages/bioinformatics.scm (freebayes): Update to 1.3.3. [source]: Add patch. Add snippet to remove vendored library. [build-system]: Switch to meson-build-system. [inputs]: Remove bamtools. Add fastahack, smithwaterman, tabixpp. [native-inputs]: Remove procps, python-2, tabixpp source, smithwaterman source, multichoose source, fsom source, filevercmp source, fastahack source, bash-tap source. Add bash-tap, grep, pkg-config, simde, vcflib. [arguments]: Drop make-flags. Don't delete 'configure phase. Delete custom 'fix-tests, 'build-tabixpp-and-vcflib, 'fix-makefiles, 'install phases. Adjust 'unpack-submodule-sources phase to changed native-inputs. Add new 'patch-source phase.
Diffstat (limited to 'gnu/local.mk')
-rw-r--r--gnu/local.mk1
1 files changed, 1 insertions, 0 deletions
diff --git a/gnu/local.mk b/gnu/local.mk
index 77f1d4a096..6f66021c78 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -998,6 +998,7 @@ dist_patch_DATA = \
%D%/packages/patches/fpc-reproducibility.patch \
%D%/packages/patches/fplll-std-fenv.patch \
%D%/packages/patches/freedink-engine-fix-sdl-hints.patch \
+ %D%/packages/patches/freebayes-devendor-deps.patch \
%D%/packages/patches/freeimage-unbundle.patch \
%D%/packages/patches/fuse-overlapping-headers.patch \
%D%/packages/patches/gajim-honour-GAJIM_PLUGIN_PATH.patch \