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author | Ricardo Wurmus <rekado@elephly.net> | 2022-05-28 17:03:02 +0200 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2022-05-28 23:19:48 +0200 |
commit | 66bfe558481a2431810d7a2d2436d06d6f8daab7 (patch) | |
tree | d2a18c277489806ba44fff27675ab90d8df9ceda | |
parent | 79158a5624a587395e36125ad5d0cc369c841af4 (diff) | |
download | guix-66bfe558481a2431810d7a2d2436d06d6f8daab7.tar guix-66bfe558481a2431810d7a2d2436d06d6f8daab7.tar.gz |
gnu: Add r-msdata.
* gnu/packages/bioconductor.scm (r-msdata): New variable.
-rw-r--r-- | gnu/packages/bioconductor.scm | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index be946ae667..518224306f 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1361,6 +1361,29 @@ genomation package. Included are Chip Seq, Methylation and Cage data, downloaded from Encode.") (license license:gpl3+))) +(define-public r-msdata + (package + (name "r-msdata") + (version "0.36.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "msdata" version 'experiment)) + (sha256 + (base32 "0nqb7d7fa9l15bxy3s9wmy2h79jb6ldwww0hzk5mifabacmzx691")))) + (properties `((upstream-name . "msdata"))) + (build-system r-build-system) + (home-page "https://bioconductor.org/packages/msdata") + (synopsis "Various Mass Spectrometry raw data example files") + (description + "This package provides Ion Trap positive ionization mode data in mzML file +format. It includes a subset from 500-850 m/z and 1190-1310 seconds, +including MS2 and MS3, intensity threshold 100.000; extracts from FTICR Apex +III, m/z 400-450; a subset of UPLC - Bruker micrOTOFq data, both mzML and mz5; +LC-MSMS and MRM files from proteomics experiments; and PSI mzIdentML example +files for various search engines.") + (license license:gpl2+))) + (define-public r-pasilla (package (name "r-pasilla") |