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authorRicardo Wurmus <rekado@elephly.net>2022-09-21 22:16:28 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-09-21 22:19:33 +0200
commitcd5bbb9b4227a29bc954db7de2e8d76b9d24bd67 (patch)
tree9e057010ed6867be6d2d421fd6bb504baf1045d6
parent97e719593045f5541d062aece1a25379be56d24d (diff)
downloadguix-cd5bbb9b4227a29bc954db7de2e8d76b9d24bd67.tar
guix-cd5bbb9b4227a29bc954db7de2e8d76b9d24bd67.tar.gz
gnu: python-cooler: Do not use flake8.
* gnu/packages/bioinformatics.scm (python-cooler)[arguments]: Add build phase 'do-not-use-flake8.
-rw-r--r--gnu/packages/bioinformatics.scm6
1 files changed, 6 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 58666cd666..fb4d93769e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -12736,6 +12736,12 @@ fasta subsequences.")
(substitute* '("requirements.txt"
"cooler.egg-info/requires.txt")
(("cytoolz.*<.*0.11") "cytoolz"))))
+ ;; This version of flake8 just won't work with this version of
+ ;; pytest, because of dependency pinning.
+ (add-after 'unpack 'do-not-use-flake8
+ (lambda _
+ (substitute* "setup.cfg"
+ (("addopts = --flake8") "addopts = "))))
(add-after 'unpack 'patch-tests
(lambda _
(substitute* "tests/test_create.py"