From 9a8f309cf1f654b9775caf0ee1bc65ee274d4117 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Tue, 12 Jul 2016 12:19:15 +0200
Subject: gnu: Add bedtools-2.18.

* gnu/packages/bioinformatics.scm (bedtools-2.18): New variable.
---
 gnu/packages/bioinformatics.scm | 15 +++++++++++++++
 1 file changed, 15 insertions(+)

(limited to 'gnu')

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5ab3bcc3ae..355b578623 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -258,6 +258,21 @@ intervals from multiple files in widely-used genomic file formats such as BAM,
 BED, GFF/GTF, VCF.")
     (license license:gpl2)))
 
+;; Later releases of bedtools produce files with more columns than
+;; what Ribotaper expects.
+(define-public bedtools-2.18
+  (package (inherit bedtools)
+    (name "bedtools")
+    (version "2.18.0")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/arq5x/bedtools2/"
+                                  "archive/v" version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "05vrnr8yp7swfagshzpgqmzk1blnwnq8pq5pckzi1m26w98d63vf"))))))
+
 (define-public bioawk
   (package
     (name "bioawk")
-- 
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