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* gnu: Add r-rhisat2.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/bioconductor.scm (r-rhisat2): New variable.
* gnu: Add r-sgseq.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/bioconductor.scm (r-sgseq): New variable.
* gnu: Add r-xgboost.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/cran.scm (r-xgboost): New variable.
* gnu: Add r-citr.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/cran.scm (r-citr): New variable.
* gnu: Add r-refmanager.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/cran.scm (r-refmanager): New variable.
* gnu: Add r-ggfortify.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/cran.scm (r-ggfortify): New variable.
* gnu: Add r-plot3d.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/cran.scm (r-plot3d): New variable.
* gnu: Add r-enrichr.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/cran.scm (r-enrichr): New variable.
* gnu: Add r-dalex.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/cran.scm (r-dalex): New variable.
* gnu: Add r-rbowtie.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/bioconductor.scm (r-rbowtie): New variable.
* gnu: Add r-iclusterplus.Ricardo Wurmus2019-05-10
| | | | * gnu/packages/bioconductor.scm (r-iclusterplus): New variable.
* gnu: linux-libre: Update to 5.1.Mark H Weaver2019-05-10
| | | | | | | | | | | | | | | | | | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 5.1. (%linux-libre-hash): Update hash. (%linux-libre-5.0-patches): Rename to ... (%linux-libre-5.1-patches): ... this. (linux-libre, linux-libre-arm-generic, linux-libre-arm-veyron) (linux-libre-arm-omap2plus): Use %linux-libre-5.1-patches. (vhba-module): Move definition below the kernel packages. * gnu/packages/aux-files/linux-libre/5.0-arm-veyron.conf, gnu/packages/aux-files/linux-libre/5.0-arm.conf, gnu/packages/aux-files/linux-libre/5.0-arm64.conf, gnu/packages/aux-files/linux-libre/5.0-i686.conf, gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: Delete files. * gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf, gnu/packages/aux-files/linux-libre/5.1-arm.conf, gnu/packages/aux-files/linux-libre/5.1-arm64.conf, gnu/packages/aux-files/linux-libre/5.1-i686.conf, gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: New files. * Makefile.am (AUX_FILES): Adjust accordingly.
* gnu: rust: Update to 1.34.1.Ivan Petkov2019-05-10
| | | | | | * gnu/packages/rust.scm (rust): Update to 1.34.1. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: rust: Make source derivations smaller.Ivan Petkov2019-05-10
| | | | | | | | | | | | | | | | | | | | | | | | | | * gnu/packages/rust.scm (rust-source-pre-1.32): Delete procedure. (rust-bootstrapped-package-pre-1.32): Delete procedure. (rust-bootstrapped-package): Remove optional keys, and return an origin. (rust-uri): New variable. (mrustc): Change native-input "rust" to use source of rust-1.19. (rust-1.19)[source]: Define package source. (rust-1.20): Use rust-bootstrapped-package. (rust-1.21): Likewise. (rust-1.22): Likewise. (rust-1.23): Likewise. (rust-1.24): Likewise. (rust-1.25): Likewise. (rust-1.26): Likewise. (rust-1.27): Likewise. (rust-1.28): Likewise. (rust-1.29): Likewise. (rust-1.30): Likewise. (rust-1.31): Likewise. (rust-1.32): Likewise. (rust-1.33): Likewise. (rust-1.34): Likewise. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: rust: Delete install logs and manifests.Ivan Petkov2019-05-10
| | | | | | | * gnu/packages/rust.scm (rust-1.20)[arguments]<#:phases>[delete-install-logs]: New phase. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* build/cargo-utils: Remove "src-name" parameter.Ivan Petkov2019-05-10
| | | | | | | | | | | | * gnu/packages/gnuzilla.scm (icecat)[arguments]<#:phases> [patch-cargo-checksums]: Delete "null-file" variable. * gnu/packages/rust.scm (%cargo-reference-project-file): Delete variable. * gnu/packages/rust.scm (rust-1.19): Remove reference to "%cargo-reference-project-file". * guix/build/cargo-utils.scm (generate-checksums): Remove "src-name" parameter. Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
* gnu: gcc-4.7: Hide package.Ricardo Wurmus2019-05-09
| | | | * gnu/packages/gcc.scm (gcc-4.7): Wrap in "hidden-package" expression.
* gnu: emacs-dash: Update to 2.16.0.Ricardo Wurmus2019-05-09
| | | | * gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.16.0.
* gnu: Add guile-file-names.Ricardo Wurmus2019-05-09
| | | | * gnu/packages/guile-xyz.scm (guile-file-names): New variable.
* gnu: seabios: Update to 1.12.1.Tobias Geerinckx-Rice2019-05-09
| | | | | | | | This is a stable release despite the missing tarball. <https://mail.coreboot.org/hyperkitty/list/seabios@seabios.org/thread/ONGRJVF3A45SAXOKBED52V2UD3YUWTRT/> * gnu/packages/firmware.scm (seabios): Update to 1.12.1. [source]: Use GIT-FETCH and GIT-FILE-NAME.
* gnu: man-pages: Update to 5.01.Tobias Geerinckx-Rice2019-05-09
| | | | * gnu/packages/man.scm (man-pages): Update to 5.01.
* gnu: emacs-sml-mode: Update to 6.9.Tobias Geerinckx-Rice2019-05-09
| | | | * gnu/packages/emacs-xyz.scm (emacs-sml-mode): Update to 6.9.
* gnu: cdemu-client: Update to 3.2.1.Tobias Geerinckx-Rice2019-05-09
| | | | * gnu/packages/cdrom.scm (cdemu-client): Update to 3.2.1.
* gnu: cdemu-daemon: Update to 3.2.2.Tobias Geerinckx-Rice2019-05-09
| | | | * gnu/packages/cdrom.scm (cdemu-daemon): Update to 3.2.2.
* gnu: libmirage: Update to 3.2.2.Tobias Geerinckx-Rice2019-05-09
| | | | * gnu/packages/cdrom.scm (libmirage): Update to 3.2.2.
* gnu: vhba-module: Update to 20190410.Tobias Geerinckx-Rice2019-05-09
| | | | * gnu/packages/linux.scm (vhba-module): Update to 20190410.
* gnu: cloc: Update to 1.82.Tobias Geerinckx-Rice2019-05-09
| | | | | * gnu/packages/code.scm (cloc): Update to 1.82. [source]: Use GIT-FETCH and GIT-FILE-NAME.
* services: dhcp-client: Ignore interfaces that are not ARP capable.Marius Bakke2019-05-09
| | | | | * gnu/services/networking.scm (dhcp-client-service-type): Filter interfaces that do not support the ARP protocol.
* gnu: Use mirror://kernel.org in source URIs.Marius Bakke2019-05-09
| | | | | * gnu/packages/linux.scm (bridge-utils, cpufrequtils, sbc)[source](uri): Use "mirror://kernel.org" instead of www.kernel.org directly.
* gnu: wpa_supplicant: Update to 2.8 [security fixes].Marius Bakke2019-05-09
| | | | | | | | | | | | This release fixes CVE-2019-9494, CVE-2019-9495, CVE-2019-9496, CVE-2019-9497, CVE-2019-9498, CVE-2019-9499, and CVE-2019-11555. * gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.8. [source](snippet): New field. Disable D-Bus. [arguments]: Change CONFIG_TLS to use OpenSSL rather than GnuTLS. This is required by many of the new default build-time settings. [inputs]: Remove GNUTLS and LIBGCRYPT. Add OPENSSL. (wpa-supplicant)[arguments]: Remove obsolete CONFIG_CTRL_IFACE_DBUS=y.
* gnu: libtorrent-rasterbar: Update to 1.1.13.Marius Bakke2019-05-09
| | | | * gnu/packages/bittorrent.scm (libtorrent-rasterbar): Update to 1.1.13.
* gnu: leveldb: Update to 1.22.Marius Bakke2019-05-09
| | | | * gnu/packages/databases.scm (leveldb): Update to 1.22.
* gnu: Mercurial: Update to 5.0Josh Holland2019-05-09
| | | | | | * gnu/packages/version-control.scm (mercurial): Update to 5.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* services: Log-in services now require "pam_loginuid".Ludovic Courtès2019-05-09
| | | | | | | | | | | | | | | | Fixes <https://bugs.gnu.org/35553>. Reported by Bruno Haible <bruno@clisp.org>. * gnu/services/base.scm (login-pam-service): Pass #:login-uid? #t to 'unix-pam-service'. * gnu/services/ssh.scm (lsh-pam-services, openssh-pam-services): Likewise. * gnu/services/xorg.scm (slim-pam-service): Likewise. (gdm-pam-service): Likewise for "gdm-autologin" and "gdm-password". * gnu/tests/base.scm (run-basic-test)["getlogin on tty1"]: New test. * gnu/tests/ssh.scm (run-ssh-test): Add #:test-getlogin? parameter. ["getlogin"]: New test. (%test-dropbear): Pass #:test-getlogin? #f.
* system: pam: Add #:login-uid? parameter to 'unix-pam-service'.Ludovic Courtès2019-05-09
| | | | | | * gnu/system/pam.scm (unix-pam-service): Add #:login-uid? parameter. In then 'session' field, add "pam_loginuid.so" as required when LOGIN-UID? is true.
* gnu: Add hostapd.Ludovic Courtès2019-05-09
| | | | * gnu/packages/admin.scm (hostapd): New variable.
* services: slim: Provide the 'xorg-server' Shepherd service.Ludovic Courtès2019-05-09
| | | | | | | This is a followup to 61569171d03146f41ba1b9aedf29fd8fa78d6102. * gnu/services/xorg.scm (slim-shepherd-service): Add 'xorg-server' to 'provision' when VT is "vt7".
* bootloader: grub: Remove unneeded 'terminal_output'.Ludovic Courtès2019-05-09
| | | | | | | | | | | Fixes <https://bugs.gnu.org/35585>. Reported by Florian Pelz <pelzflorian@pelzflorian.de>. This statement was added in 8d058e7b1b1a409d3d9cc29c5650a98db4e78783 but turned out to be unnecessary. * gnu/bootloader/grub.scm (grub-configuration-file): Remove 'terminal_output' statement.
* installer: Add missing 'G_' call.Ludovic Courtès2019-05-09
| | | | | * gnu/installer/newt/user.scm (run-user-page): Add 'G_' call for "User creation".
* gnu: Add python-pylibmc.Maxim Cournoyer2019-05-09
| | | | * gnu/packages/databases.scm (python-pylibmc, python2-pylibmc): New variables.
* gnu: Add libmemcached.Maxim Cournoyer2019-05-09
| | | | * gnu/packages/databases.scm (libmemcached): New variable.
* gnu: linux-libre: Update to 5.0.14.Mark H Weaver2019-05-08
| | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.14. (%linux-libre-hash): Update hash.
* gnu: linux-libre@4.19: Update to 4.19.41.Mark H Weaver2019-05-08
| | | | | * gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.41. (%linux-libre-4.19-hash): Update hash.
* gnu: linux-libre@4.14: Update to 4.14.117.Mark H Weaver2019-05-08
| | | | | * gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.117. (%linux-libre-4.14-hash): Update hash.
* gnu: linux-libre@4.9: Update to 4.9.174.Mark H Weaver2019-05-08
| | | | * gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.174.
* gnu: usbutils: Add ‘python’ output.Tobias Geerinckx-Rice2019-05-09
| | | | | * gnu/packages/linux.scm (usbutils)[outputs]: Add ‘python’. [arguments]: Add ‘separate-python-output’ phase.
* gnu: usbutils: Fix broken lsusb.py.Tobias Geerinckx-Rice2019-05-09
| | | | * gnu/packages/linux.scm (usbutils)[inputs]: Add python.
* gnu: usbutils: Update to 012.Tobias Geerinckx-Rice2019-05-09
| | | | | | * gnu/packages/linux.scm (usbutils): Update to 012. [arguments]: Add ‘patch-bootstrap-scripts’ phase. [native-inputs]: Add autoconf, automake, and libtool.
* gnu: mbpfan: Update to 2.1.1.Tobias Geerinckx-Rice2019-05-08
| | | | * gnu/packages/linux.scm (mbpfan): Update to 2.1.1.
* gnu: dovecot: Update to 2.3.6.Tobias Geerinckx-Rice2019-05-08
| | | | * gnu/packages/mail.scm (dovecot): Update to 2.3.6.