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This repository contains snapshots of GNU Guix, to be used by the govuk-guix project.
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bioinformatics.scm
Commit message (
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Author
Age
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gnu: Add snap-aligner.
Ben Woodcroft
2015-12-11
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gnu: python-biopython, python2-biopython: Update to 1.66.
Ben Woodcroft
2015-12-10
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gnu: preseq: Update to 2.0.
Ricardo Wurmus
2015-11-20
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gnu: Add smithlab-cpp.
Ricardo Wurmus
2015-11-20
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gnu: edirect: Update home page.
Ricardo Wurmus
2015-11-20
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gnu: sra-tools: Update to 2.5.4.
Ricardo Wurmus
2015-11-20
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gnu: ncbi-vdb: Update to 2.5.4.
Ricardo Wurmus
2015-11-20
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gnu: ngs-java: Update to 1.2.2.
Ricardo Wurmus
2015-11-20
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gnu: ngs-sdk: Update to 1.2.2.
Ricardo Wurmus
2015-11-20
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gnu: bless: Build only for x86_64.
Ricardo Wurmus
2015-11-20
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gnu: htseq: Propagate numpy.
Ricardo Wurmus
2015-11-20
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gnu: mosaik: Build only on x86_64.
Ricardo Wurmus
2015-11-12
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gnu: bless: Correct indentation and home-page.
Ricardo Wurmus
2015-11-06
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gnu: Add BLESS.
Ricardo Wurmus
2015-11-06
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gnu: hisat: Disable build on non-x86_64.
Ricardo Wurmus
2015-11-02
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gnu: Add express-beta-diversity.
Ben Woodcroft
2015-11-02
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gnu: pbtranscript-tofu: Update to 2.2.3.
Ricardo Wurmus
2015-10-28
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gnu: subread: Use SSE optimizations on x86_64 only.
Ricardo Wurmus
2015-10-27
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gnu: crossmap: Update to 0.2.1.
Ricardo Wurmus
2015-10-27
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gnu: Add MOSAIK.
Ricardo Wurmus
2015-10-22
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gnu: ngs-sdk: Correct typo.
Andreas Enge
2015-10-17
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gnu: ngs-sdk: Remove unsupported systems.
Andreas Enge
2015-10-17
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gnu: diamond: Restrict supported systems to x86_64-linux.
Ben Woodcroft
2015-10-14
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gnu: bwa: Disable on non-x86_64.
Ricardo Wurmus
2015-10-12
*
gnu: vsearch: Restrict supported systems to x86_64-linux.
Ben Woodcroft
2015-10-03
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gnu: clipper: Add 'file-name' field to source origin.
Mark H Weaver
2015-10-02
*
gnu: Add vsearch.
Ben Woodcroft
2015-10-01
*
gnu: Add bio-blastxmlparser.
Pjotr Prins
2015-09-28
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Merge branch 'core-updates'
Ludovic Courtès
2015-09-26
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Merge branch 'master' into core-updates
Mark H Weaver
2015-09-22
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Merge branch 'master' into core-updates
Ludovic Courtès
2015-09-13
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gnu: Use 'install-file' instead of 'mkdir-p' and 'copy-file' in obvious cases.
Ludovic Courtès
2015-08-29
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gnu: Add seqmagick.
Ben Woodcroft
2015-09-25
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gnu: Add R/qtl.
Andreas Enge
2015-09-20
*
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gnu: Add bioruby.
Pjotr Prins
2015-09-19
*
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gnu: Add mafft.
Ben Woodcroft
2015-09-16
*
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gnu: Add bio-locus.
Pjotr Prins
2015-09-14
*
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Revert "gnu: Add bio-locus."
David Thompson
2015-09-14
*
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gnu: Add bio-locus.
Pjotr Prins
2015-09-14
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gnu: Add deeptools.
Ricardo Wurmus
2015-09-02
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gnu: Add BioPerl.
Ricardo Wurmus
2015-08-26
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gnu: shogun: Move package to machine-learning.scm.
Ricardo Wurmus
2015-08-14
*
gnu: bedtools: Add patch to fix compilation on 32 bit systems.
Ben Woodcroft
2015-07-25
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gnu: bedtools: Update to 2.24.0.
Ben Woodcroft
2015-07-25
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gnu: Add aragorn.
Ben Woodcroft
2015-07-21
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gnu: metabat: Minor tweaks.
Mark H Weaver
2015-07-19
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gnu: Add metabat.
Ben Woodcroft
2015-07-19
*
gnu: preseq: Move "use-samtools-headers" phase.
Ricardo Wurmus
2015-07-09
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gnu: Add preseq.
Ricardo Wurmus
2015-07-08
*
gnu: samtools: Install headers.
Ricardo Wurmus
2015-07-08
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