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* gnu: Add lyx.Danny Milosavljevic2018-03-22
| | | | | | * gnu/packages/patches/lyx-2.2.3-fix-test.patch: New file. * gnu/local.mk: Add it. * gnu/packages/tex.scm (lyx): New variable.
* gnu: node: Update to 9.9.0.Jelle Licht2018-03-22
| | | | * gnu/packages/node.scm (node): Update to 9.9.0.
* gnu: krita: Update to 4.0.0.Leo Famulari2018-03-22
| | | | * gnu/packages/kde.scm (krita): Update to 4.0.0.
* gnu: darktable: Update to 2.4.2.Leo Famulari2018-03-22
| | | | * gnu/packages/photo.scm (darktable): Update to 2.4.2.
* gnu: r-bookdown: Do not propagate ghc-pandoc.Ricardo Wurmus2018-03-22
| | | | | | | | This package propagates r-rmarkdown, which propagates its own variant of Pandoc. * gnu/packages/bioinformatics.scm (r-bookdown)[propagated-inputs]: Remove ghc-pandoc.
* gnu: nginx: Update to 1.13.10.Marius Bakke2018-03-22
| | | | | * gnu/packages/web.scm (nginx): Update to 1.13.10. [arguments]: Update kernel version to match glibc minimum requirement.
* gnu: nmap: Update to 7.70.Marius Bakke2018-03-22
| | | | | | * gnu/packages/admin.scm (nmap): Update to 7.70. [source](snippet): End on #t. [inputs]: Add ZLIB.
* gnu: talloc: Update to 2.1.12.Marius Bakke2018-03-22
| | | | * gnu/packages/samba.scm (talloc): Update to 2.1.12.
* gnu: certbot: Update to 0.22.2.Marius Bakke2018-03-22
| | | | * gnu/packages/tls.scm (python-acme, certbot): Update to 0.22.2.
* gnu: python-cryptography: Update to 2.2.1.Marius Bakke2018-03-22
| | | | | * gnu/packages/python-crypto.scm (python-cryptography-vectors, python-cryptography): Update to 2.2.1.
* publish: Always build a new derivation for the "/log/NAME" test.Ludovic Courtès2018-03-22
| | | | | | | Fixes <https://bugs.gnu.org/30868>. Reported by Martin Castillo <castilma@uni-bremen.de>. * tests/publish.scm ("/log/NAME"): Use #$(random-text) in the builder.
* publish: Add test for non-GET queries.Ludovic Courtès2018-03-22
| | | | * tests/publish.scm ("non-GET query"): New test.
* gnu: Add supercollider.Maxim Cournoyer2018-03-22
| | | | | | * gnu/packages/audio.scm (supercollider): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: yaml-cpp: Update to 0.6.1.Maxim Cournoyer2018-03-22
| | | | | | * gnu/packages/serialization.scm (yaml-cpp): Update to 0.6.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: Add boost-sync.Maxim Cournoyer2018-03-22
| | | | | | * gnu/packages/boost.scm (boost-sync): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* doc: Add index entries for realtime and jackd in the manual.Maxim Cournoyer2018-03-22
| | | | | | | | * doc/guix.texi (Base Services): Add realtime and jackd indices to the `pam-limits-service' service, as the examples shows how they can be configured. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: shepherd: Update to 0.4.0.Ludovic Courtès2018-03-22
| | | | | | | | | * gnu/packages/admin.scm (shepherd): Update to 0.4.0. Remove patches. * gnu/packages/patches/shepherd-close-fds.patch, gnu/packages/patches/shepherd-herd-status-sorted.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/services/admin.scm (%default-rotations): Remove /var/log/shepherd.log.
* services: rottlog: Add /var/log/debug to '%default-rotations'.Ludovic Courtès2018-03-22
| | | | * gnu/services/admin.scm (%rotated-files): Add "/var/log/debug".
* gnu: linux-libre: Update to 4.15.12.Mark H Weaver2018-03-21
| | | | | * gnu/packages/linux.scm (%linux-libre-version): Update to 4.15.12. (%linux-libre-hash): Update hash.
* gnu: linux-libre@4.14: Update to 4.14.29.Mark H Weaver2018-03-21
| | | | | * gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.29. (%linux-libre-4.14-hash): Update hash.
* gnu: emacs-deferred: Update to 0.5.1.Vasile Dumitrascu2018-03-22
| | | | | | * gnu/packages/emacs.scm (emacs-deferred): Update to 0.5.1. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: emacs-clojure-mode: Update to 5.6.1.Vasile Dumitrascu2018-03-22
| | | | * gnu/packages/emacs.scm (emacs-clojure-mode): Update to 5.6.1.
* Fix copyright notice for Nils Gillmann.Leo Famulari2018-03-21
| | | | | | This is a followup to commit af23710ff522bb4e6cedf841c4fb977d96c9d8b3. * gnu/packages/linux.scm: Fix name and email address for Nils Gillmann.
* gnu: mpd: Update to 0.20.18.Leo Famulari2018-03-21
| | | | * gnu/packages/mpd.scm (mpd): Update to 0.20.18.
* gnu: Add tinyscheme.Tobias Geerinckx-Rice2018-03-21
| | | | * gnu/packages/scheme.scm (tinyscheme): New public variable.
* gnu: libosinfo: Update usb.ids.Tobias Geerinckx-Rice2018-03-21
| | | | | | | | | This follows up commit 0def9120882f90372fd6bb2e80e8330d67745610, which tried to use the CVS ID as the SVN revision, which unfortunately doesn't work. * gnu/packages/virtualization.scm (libosinfo)[native-inputs]: Update revision and hash for ‘usb.ids’.
* gnu: rawtherapee: Update to 5.4.Leo Famulari2018-03-21
| | | | * gnu/packages/photo.scm (rawtherapee): Update to 5.4.
* gnu: pigx-chipseq: Update to 0.0.10.Ricardo Wurmus2018-03-21
| | | | | | | * gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.10. [inputs]: Remove r-rcas and duplicate of snakemake; add r-biocparallel, r-biostrings, r-dplyr, r-genomicalignments, rsamtools, r-s4vectors, r-tibble, r-tidyr, r-htmlwidgets, and r-rmarkdown.
* gnu: libosinfo: Fix URL for usb.ids.Danny Milosavljevic2018-03-21
| | | | | | | Fixes <http://bugs.gnu.org/30890>. * gnu/packages/virtualization.scm (libosinfo)[native-inputs]: Fix URL of "usb.ids".
* gnu: texlive-fonts-amsfonts: Make build reproducible.Danny Milosavljevic2018-03-21
| | | | | * gnu/packages/tex.scm (texlive-fonts-amsfonts)[arguments]<#:phases>[build]: Make build reproducible.
* gnu: util-linux: Fix CVE-2018-7738 without grafting.Leo Famulari2018-03-20
| | | | | | * gnu/packages/linux.scm (util-linux)[replacement]: Remove field. (util-linux-2.31.1): New variable. * gnu/system.scm (%base-packages): Use util-linux-2.31.1.
* gnu: gparted: Update to 0.31.0.Tobias Geerinckx-Rice2018-03-20
| | | | * gnu/packages/disk.scm (gparted): Update to 0.31.0.
* gnu: coq-flocq: Update phase style.Tobias Geerinckx-Rice2018-03-20
| | | | | * gnu/packages/ocaml.scm (coq-flocq)[arguments]: Substitute INVOKE for SYSTEM* and end all phases with an explicit #t.
* gnu: leocad: Use HTTPS home page.Tobias Geerinckx-Rice2018-03-20
| | | | * gnu/packages/lego.scm (leocad)[home-page]: Use HTTPS.
* gnu: leocad: Update phase style.Tobias Geerinckx-Rice2018-03-20
| | | | | * gnu/packages/lego.scm (leocad)[arguments]: Substitute INVOKE for SYSTEM* and end all phases with an explicit #t.
* gnu: leocad: Update to 18.02.Tobias Geerinckx-Rice2018-03-20
| | | | * gnu/packages/lego.scm (leocad): Update to 18.02.
* gnu: gmp-ecm: Update to 7.0.4.Tobias Geerinckx-Rice2018-03-20
| | | | | * gnu/packages/algebra.scm (gmp-ecm): Update to 7.0.4. [source]: Use predictable URI.
* gnu: r-spams: Use predictable source URI.Tobias Geerinckx-Rice2018-03-20
| | | | | * gnu/packages/statistics.scm (r-spams)[source]: Use predictable URI.
* gnu: pigx-chipseq: Update to 0.0.9.Ricardo Wurmus2018-03-20
| | | | | * gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.9. [inputs]: Add coreutils and grep.
* gnu: Add python-logwrap.Vijayalakshmi2018-03-20
| | | | | | * gnu/packages/python.scm (python-logwrap): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: python-ptyprocess: Update source URL.Oleg Pykhalov2018-03-20
| | | | * gnu/packages/python.scm (python-ptyprocess)[origin](source): Update URL.
* gnu: rofi: Update source hash.Marius Bakke2018-03-20
| | | | | | | | The tarball was updated in-place with a bugfix; see <https://github.com/DaveDavenport/rofi/issues/782>. * gnu/packages/xdisorg.scm (rofi)[source](sha256): Adjust hash. [arguments]: Remove phase 'add-missing-configuration-files'.
* Correct name and Email for ng0.ng02018-03-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * .mailmap: Correct name and Email for ng0. * Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish gnu/packages/accessibility.scm, gnu/packages/admin.scm, gnu/packages/audio.scm, gnu/packages/autotools.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/cinnamon.scm, gnu/packages/compression.scm, gnu/packages/crypto.scm, gnu/packages/databases.scm, gnu/packages/django.scm, gnu/packages/dns.scm, gnu/packages/emacs.scm, gnu/packages/enlightenment.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/forth.scm, gnu/packages/fvwm.scm, gnu/packages/games.scm, gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm, gnu/packages/gnuzilla.scm, gnu/packages/gtk.scm, gnu/packages/guile-wm.scm, gnu/packages/guile.scm, gnu/packages/haskell-check.scm, gnu/packages/haskell-crypto.scm, gnu/packages/haskell.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/language.scm, gnu/packages/libcanberra.scm, gnu/packages/linux.scm, gnu/packages/lisp.scm, gnu/packages/lolcode.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/mate.scm, gnu/packages/maths.scm, gnu/packages/mc.scm, gnu/packages/messaging.scm, gnu/packages/music.scm, gnu/packages/ncurses.scm, gnu/packages/networking.scm, gnu/packages/nickle.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm, gnu/packages/perl-check.scm, gnu/packages/perl.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/ssh.scm, gnu/packages/suckless.scm, gnu/packages/tbb.scm, gnu/packages/telephony.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/web.scm, gnu/packages/wm.scm, gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/services/certbot.scm, gnu/services/desktop.scm, gnu/services/version-control.scm, gnu/services/web.scm, guix/import/hackage.scm, guix/licenses.scm: Likewise. Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
* gnu: ruby-sanitize: Update to 4.6.3.Kei Kebreau2018-03-20
| | | | | | This fixes CVE-2018-3740. * gnu/packages/ruby.scm (ruby-sanitize): Update to 4.6.3.
* gnu: cdogs-sdl: Update to commit bab20313.宋文武2018-03-20
| | | | | | | | Fixes <https://bugs.gnu.org/30623>. * gnu/packages/games.scm (cdogs-sdl): Update to commit bab2031369b9ea2dbeb7eedbde10a43dd8ca83db. [source]: Use git-fetch.
* gnu: Add r-dyn.Sahithi Yarlagadda2018-03-20
| | | | * gnu/packages/cran.scm (r-dyn): New variable.
* gnu: pigx-bsseq: Update to 0.0.8.Ricardo Wurmus2018-03-20
| | | | * gnu/packages/bioinformatics.scm (pigx-bsseq): Update to 0.0.8.
* Merge branch 'staging'Marius Bakke2018-03-20
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| * Revert "Revert "gnu: patchelf: Update argument phase.""Marius Bakke2018-03-20
| | | | | | | | | | | | This change only affects armhf, which doesn't use PatchELF. My bad! This reverts commit b1d096f869ed53b84486855d73c7e9070fdf3ae2.
| * Revert "build-system/meson: Use 'target-arm32?' for armhf-linux case."Marius Bakke2018-03-20
| | | | | | | | | | | | | | This requires adding (guix utils) to the build inputs, and causes too many rebuilds for now. This reverts commit 24a2e9172a2d8970d57865c6130f2184385183a3.
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