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* Merge branch 'master' into core-updatesMark H Weaver2015-09-22
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| * scripts: Add 'build-package'.Alex Kost2015-09-22
| | | | | | | | | | | | | | | | * guix/scripts/system.scm (maybe-build): Move to ... * guix/scripts.scm: ...here. (build-package): New procedure. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
| * emacs: Add code to call guile procedures.Alex Kost2015-09-22
| | | | | | | | | | | | * emacs/guix-guile.el (guix-guile-make-call-expression): New function. * emacs/guix-geiser.el: Require 'guix-guile'. (guix-geiser-call, guix-geiser-call-in-repl): New functions.
| * emacs: Move code for evaluating to "guix-geiser.el".Alex Kost2015-09-22
| | | | | | | | | | | | | | | | | | | | * emacs/guix-backend.el: Adjust commentary. Move "eval" code to ... (guix-eval, guix-eval-read, guix-eval-in-repl): Adjust to use new functions. * emacs/guix-geiser.el: ...here. New file. (guix-geiser-eval, guix-geiser-eval-read, guix-geiser-eval-in-repl, guix-repl-send): New functions. * emacs.am (ELFILES): Add "guix-geiser.el".
| * emacs: Move guile related code to "guix-guile.el".Alex Kost2015-09-22
| | | | | | | | | | | | | | | | * emacs/guix-backend.el (guix-make-guile-expression): Move to... * emacs/guix-guile.el: ... here. New file. * emacs/guix-base.el: Use it. * emacs/guix-command.el: Use it. * emacs.am (ELFILES): Add it.
| * gnu: linux-libre: Update to 4.2.1.Mark H Weaver2015-09-22
| | | | | | | | * gnu/packages/linux.scm (linux-libre): Update to 4.2.1.
| * gnu: recutils: Add libuuid to native-inputs.Leo Famulari2015-09-22
| | | | | | | | | | | | * gnu/packages/databases.scm (recutils)[native-inputs]: Add "libuuid". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| * licenses: Add Zope Public License.Ricardo Wurmus2015-09-22
| | | | | | | | * guix/licenses.scm (zpl2.1): New variable.
| * emacs: Improve 'guix-prettify-regexp'.Alex Kost2015-09-22
| | | | | | | | | | * emacs/guix-prettify.el (guix-prettify-regexp): Modify to handle "nar" and "log".
| * gnu: python2-ipython: Override terminado in propagated inputs.Ricardo Wurmus2015-09-21
| | | | | | | | | | | | * gnu/packages/python.scm (python2-ipython)[inputs, propagated-inputs]: Override inherited "python-terminado" in propagated inputs instead of regular inputs.
| * gnu: r-scales: Update to 0.3.0.Ricardo Wurmus2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-scales): Update to 0.3.0.
| * Update CRAN mirrors.Ricardo Wurmus2015-09-21
| | | | | | | | * guix/download.scm (%mirrors): Update mirror list for CRAN.
| * gnu: Add r-dplyr.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-dplyr): New variable.
| * gnu: Add r-r6.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-r6): New variable.
| * gnu: Add r-testthat.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-testthat): New variable.
| * gnu: Add r-crayon.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-crayon): New variable.
| * gnu: Add r-memoise.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-memoise): New variable.
| * gnu: Add r-pryr.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-pryr): New variable.
| * gnu: Add r-codetools.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-codetools): New variable.
| * gnu: Add r-microbenchmark.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-microbenchmark): New variable.
| * gnu: Add r-knitr.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-knitr): New variable.
| * gnu: Add r-yaml.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-yaml): New variable.
| * gnu: Add r-markdown.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-markdown): New variable.
| * gnu: Add r-mime.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-mime): New variable.
| * gnu: Add r-highr.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-highr): New variable.
| * gnu: Add r-formatr.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-formatr): New variable.
| * gnu: Add r-evaluate.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-evaluate): New variable.
| * gnu: Add r-bh.Vicente Vera Parra2015-09-21
| | | | | | | | * gnu/packages/statistics.scm (r-bh): New variable.
| * gnu: Use cran-uri in source expressions.Ricardo Wurmus2015-09-21
| | | | | | | | | | | | | | * gnu/packages/statistics.scm (r-colorspace, r-dichromat, r-digest, r-gtable, r-labeling, r-magrittr, r-munsell, r-rcpp, r-plyr, r-proto, r-rcolorbrewer, r-stringi, r-stringr, r-reshape2, r-scales, r-ggplot2, r-assertthat, r-lazyeval, r-dbi): Use cran-uri in source expressions.
| * import: cran-sxml->sexp: Use cran-uri in package expression.Ricardo Wurmus2015-09-21
| | | | | | | | | | * guix/import/cran.scm (cran-sxml->sexp): Use the cran-uri procedure in the generated package expression.
| * build: Add cran-uri procedure.Ricardo Wurmus2015-09-21
| | | | | | | | * guix/build-system/r.scm (cran-uri): New procedure.
| * gnu: Add shotwell.Ricardo Wurmus2015-09-21
| | | | | | | | * gnu/packages/gnome.scm (shotwell): New variable.
| * gnu: Add gexiv2.Ricardo Wurmus2015-09-21
| | | | | | | | * gnu/packages/gnome.scm (gexiv2): New variable.
| * gnu: Add libgee.Ricardo Wurmus2015-09-21
| | | | | | | | * gnu/packages/gnome.scm (libgee): New variable.
| * gnu: autogen: Update to 5.18.6.Eric Bavier2015-09-20
| | | | | | | | * gnu/packages/autogen.scm (autogen): Update to 5.18.6.
| * gnu: gnu-pw-mgr: Update to 1.5.Eric Bavier2015-09-20
| | | | | | | | * gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 1.5.
| * Thank Petter.Ludovic Courtès2015-09-20
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| * linux-initrd: Add LUKS/dm-crypt modules to the initrd.Ludovic Courtès2015-09-20
| | | | | | | | | | | | | | | | | | | | Suggested by Petter <petter@mykolab.ch> and Mark H Weaver <mhw@netris.org>. Partly fixes <http://bugs.gnu.org/19190>. * gnu/system/linux-initrd.scm (base-initrd)[linux-modules]: Add dm-crypt and xts.
| * linux-boot: Mount /dev as a devtmpfs from the start.Ludovic Courtès2015-09-20
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | Suggested by Petter <petter@mykolab.ch> and Mark H Weaver <mhw@netris.org>. Reported by Duncan Keall <duncan@duncankeall.com>. Partly fixes <http://bugs.gnu.org/19190> by populating /dev/mapper early enough. * gnu/build/linux-boot.scm (mount-essential-file-systems): Mount /dev as a devtmpfs. (move-essential-file-systems): Add /dev. (mount-root-file-system): Mount /rw-root/dev as a devtmpfs instead of calling 'make-essential-device-nodes'. (boot-system): Remove call to 'make-essential-device-nodes'. * gnu/system/file-systems.scm (%devtmpfs-file-system): Remove. * doc/guix.texi (File Systems): Adjust accordingly.
| * gnu: openal: Use full path to audio backend libraries.Ricardo Wurmus2015-09-20
| | | | | | | | | | * gnu/packages/audio.scm (openal)[arguments]: Add build phase to patch in the full paths to backend audio libraries.
| * gnu: vpnc: Use https for source URL.Ricardo Wurmus2015-09-20
| | | | | | | | * gnu/packages/vpn.scm (vpnc)[source]: Use https protocol for source URL.
| * gnu: lilypond: Update to 2.19.27.Ricardo Wurmus2015-09-20
| | | | | | | | | | * gnu/packages/music.scm (lilypond): Update to 2.19.27. [inputs]: Add font-tex-gyre.
| * gnu: sfml: Update to 2.3.2.Ricardo Wurmus2015-09-20
| | | | | | | | | | * gnu/packages/game-development.scm (sfml): Update to 2.3.2. [native-inputs]: Remove.
| * gnu: Add python2-keyring.Cyril Roelandt2015-09-20
| | | | | | | | * gnu/packages/python.scm (python2-keyring): New variable.
| * gnu: Add python2-pyflakes and fix python2-pyflakes-0.8.1.Cyril Roelandt2015-09-20
| | | | | | | | | | * gnu/packages/python.scm (python2-pyflakes): New variable. * gnu/packages/python.scm (python2-pyflakes-0.8.1): Fix the definition.
| * gnu: Add python-prettytableCyril Roelandt2015-09-20
| | | | | | | | | | * gnu/packages/python.scm (python-prettytable, python2-prettytable): New variables.
| * gnu: Add R/qtl.Andreas Enge2015-09-20
| | | | | | | | | | | | * gnu/packages/bioinformatics.scm (r-qtl): New variable. Co-authored-by: Pjotr Prins <pjotr.guix@thebird.nl>
| * gnu: libmtp: Add additional MTP devices.Andreas Enge2015-09-19
| | | | | | | | | | | | * gnu/packages/patches/libmtp-devices.patch: New file. * gnu-system.am (dist_patch_DATA): Register patch. * gnu/packages/patches/libmtp-devices.patch (libmtp)[source]: Add patch.
| * gnu: Add bioruby.Pjotr Prins2015-09-19
| | | | | | | | * gnu/packages/bioinformatics.scm (bioruby): New variable.
| * gnu: Add ruby-libxml.Pjotr Prins2015-09-19
| | | | | | | | * gnu/packages/ruby.scm (ruby-libxml): New variable.
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